RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 ATP2B3Q16720 1220 aa20.39■□□□□ 0.85
EXTL3-201ENST00000220562 COPS6Q7L5N1 327 aa20.39■□□□□ 0.85
EXTL3-201ENST00000220562 HOMER2Q9NSB8 354 aa20.39■□□□□ 0.85
EXTL3-201ENST00000220562 AKR1B10O60218 316 aa20.39■□□□□ 0.85
EXTL3-201ENST00000220562 MRPS27Q92552 414 aaKnown RBP20.39■□□□□ 0.85
EXTL3-201ENST00000220562 AOPEPQ8N6M6 819 aa20.39■□□□□ 0.85
EXTL3-201ENST00000220562 PCDHB15Q9Y5E8 787 aa20.39■□□□□ 0.85
EXTL3-201ENST00000220562 SLC39A6Q13433 755 aa20.39■□□□□ 0.85
EXTL3-201ENST00000220562 PPIP5K1Q6PFW1 1433 aa20.39■□□□□ 0.85
EXTL3-201ENST00000220562 CEP112Q8N8E3 955 aa20.39■□□□□ 0.85
EXTL3-201ENST00000220562 F8W031 263 aaPredicted RBP20.38■□□□□ 0.85
EXTL3-201ENST00000220562 BMS1Q14692 1282 aaKnown RBP20.38■□□□□ 0.85
EXTL3-201ENST00000220562 CEP63Q96MT8 703 aa20.38■□□□□ 0.85
EXTL3-201ENST00000220562 FAM107BQ9H098 131 aa20.38■□□□□ 0.85
EXTL3-201ENST00000220562 ATP8B2P98198 1209 aa20.38■□□□□ 0.85
EXTL3-201ENST00000220562 CCDC172P0C7W6 258 aa20.38■□□□□ 0.85
EXTL3-201ENST00000220562 CKAP4Q07065 602 aaKnown RBP20.38■□□□□ 0.85
EXTL3-201ENST00000220562 PICALMQ13492 652 aa20.38■□□□□ 0.85
EXTL3-201ENST00000220562 KIAA0753Q2KHM9 967 aa20.38■□□□□ 0.85
EXTL3-201ENST00000220562 TMTC2Q8N394 836 aa20.38■□□□□ 0.85
EXTL3-201ENST00000220562 DENND4BO75064 1496 aaPredicted RBP20.38■□□□□ 0.85
EXTL3-201ENST00000220562 GRM8O00222 908 aa20.38■□□□□ 0.85
EXTL3-201ENST00000220562 C8orf58Q8NAV2 365 aa20.38■□□□□ 0.85
EXTL3-201ENST00000220562 RNF216Q9NWF9 866 aaPredicted RBP20.38■□□□□ 0.85
EXTL3-201ENST00000220562 F13A1P00488 732 aa20.37■□□□□ 0.85
EXTL3-201ENST00000220562 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
EXTL3-201ENST00000220562 ACSBG1Q96GR2 724 aa20.37■□□□□ 0.85
EXTL3-201ENST00000220562 DRC1Q96MC2 740 aa20.37■□□□□ 0.85
EXTL3-201ENST00000220562 BMP15O95972 392 aa20.37■□□□□ 0.85
EXTL3-201ENST00000220562 ANKRD44Q8N8A2 993 aa20.37■□□□□ 0.85
EXTL3-201ENST00000220562 ZCRB1Q8TBF4 217 aaKnown RBP20.37■□□□□ 0.85
EXTL3-201ENST00000220562 DNM1Q05193 864 aaKnown RBP20.37■□□□□ 0.85
EXTL3-201ENST00000220562 CYLC1P35663 651 aaPredicted RBP20.37■□□□□ 0.85
EXTL3-201ENST00000220562 DNAJC25Q9H1X3 360 aa20.36■□□□□ 0.85
EXTL3-201ENST00000220562 PRIMPOLQ96LW4 560 aa20.36■□□□□ 0.85
EXTL3-201ENST00000220562 PSMD1Q99460 953 aa20.36■□□□□ 0.85
EXTL3-201ENST00000220562 SKILP12757 684 aa20.36■□□□□ 0.85
EXTL3-201ENST00000220562 PA2G4Q9UQ80 394 aaKnown RBP20.36■□□□□ 0.85
EXTL3-201ENST00000220562 PAG1Q9NWQ8 432 aa20.36■□□□□ 0.85
EXTL3-201ENST00000220562 RTL1A6NKG5 1358 aa20.36■□□□□ 0.85
EXTL3-201ENST00000220562 SPECC1LQ69YQ0 1117 aa20.36■□□□□ 0.85
EXTL3-201ENST00000220562 LMBR1LQ6UX01 489 aa20.36■□□□□ 0.85
EXTL3-201ENST00000220562 ZGPATQ8N5A5 531 aaKnown RBP20.36■□□□□ 0.85
EXTL3-201ENST00000220562 ZFP91Q96JP5 570 aaPredicted RBP20.36■□□□□ 0.85
EXTL3-201ENST00000220562 NAPAP54920 295 aa20.35■□□□□ 0.85
EXTL3-201ENST00000220562 SLC9C2Q5TAH2 1124 aa20.35■□□□□ 0.85
EXTL3-201ENST00000220562 DYNC1I1O14576 645 aa20.35■□□□□ 0.85
EXTL3-201ENST00000220562 NAA16Q6N069 864 aaPredicted RBP20.35■□□□□ 0.85
EXTL3-201ENST00000220562 TMEM87AQ8NBN3 555 aa20.35■□□□□ 0.85
EXTL3-201ENST00000220562 DHX58Q96C10 678 aa20.35■□□□□ 0.85
EXTL3-201ENST00000220562 SYNCQ9H7C4 482 aa20.35■□□□□ 0.85
EXTL3-201ENST00000220562 DACT1Q9NYF0 836 aa20.35■□□□□ 0.85
EXTL3-201ENST00000220562 MAGEB6P1A0A0J9YX57 407 aa20.35■□□□□ 0.85
EXTL3-201ENST00000220562 RGS22Q8NE09 1264 aa20.35■□□□□ 0.85
EXTL3-201ENST00000220562 SPAG5Q96R06 1193 aa20.35■□□□□ 0.85
EXTL3-201ENST00000220562 MPHOSPH6Q99547 160 aaKnown RBP20.35■□□□□ 0.85
EXTL3-201ENST00000220562 KSR2Q6VAB6 950 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 TSNARE1Q96NA8 513 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 SETDB2Q96T68 719 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 FERMT1Q9BQL6 677 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 IKBKGQ9Y6K9 419 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 PTGS1P23219 599 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 ASIC1P78348 528 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 CCDC186Q7Z3E2 898 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 BBXQ8WY36 941 aaPredicted RBP20.34■□□□□ 0.85
EXTL3-201ENST00000220562 ALDH1L1O75891 902 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 DNAI1Q9UI46 699 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 AKAP4Q5JQC9 854 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 SBNO2Q9Y2G9 1366 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 A0A1W2PRG0 241 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 CTAGE15A4D2H0 777 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 CTAGE8P0CG41 777 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 KRT13P13646 458 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 ACTN2P35609 894 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 IL15P40933 162 aaPredicted RBP20.34■□□□□ 0.85
EXTL3-201ENST00000220562 CTAGE6Q86UF2 777 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 CTAGE4Q8IX94 777 aa20.34■□□□□ 0.85
EXTL3-201ENST00000220562 CCDC155Q8N6L0 562 aa20.33■□□□□ 0.85
EXTL3-201ENST00000220562 FAM200AQ8TCP9 573 aa20.33■□□□□ 0.85
EXTL3-201ENST00000220562 NOLC1Q14978 699 aaKnown RBP eCLIP20.33■□□□□ 0.85
EXTL3-201ENST00000220562 CHST3Q7LGC8 479 aa20.33■□□□□ 0.85
EXTL3-201ENST00000220562 KDM5BQ9UGL1 1544 aa20.33■□□□□ 0.85
EXTL3-201ENST00000220562 CALM1P0DP23 149 aa20.33■□□□□ 0.84
EXTL3-201ENST00000220562 CALM2P0DP24 149 aa20.33■□□□□ 0.84
EXTL3-201ENST00000220562 CALM3P0DP25 149 aa20.33■□□□□ 0.84
EXTL3-201ENST00000220562 SYT1P21579 422 aa20.33■□□□□ 0.84
EXTL3-201ENST00000220562 MRVI1Q9Y6F6 885 aa20.33■□□□□ 0.84
EXTL3-201ENST00000220562 PPP1R14CQ8TAE6 165 aa20.32■□□□□ 0.84
EXTL3-201ENST00000220562 SELENOOQ9BVL4 669 aa20.32■□□□□ 0.84
EXTL3-201ENST00000220562 LAMC3Q9Y6N6 1575 aa20.32■□□□□ 0.84
EXTL3-201ENST00000220562 ATP2C2O75185 946 aa20.32■□□□□ 0.84
EXTL3-201ENST00000220562 THOC2Q8NI27 1593 aaKnown RBP20.31■□□□□ 0.84
EXTL3-201ENST00000220562 KRT2P35908 639 aa20.31■□□□□ 0.84
EXTL3-201ENST00000220562 UTP14AQ9BVJ6 771 aaKnown RBP20.31■□□□□ 0.84
EXTL3-201ENST00000220562 TMEM110-MUSTN1A8MSY1 372 aa20.31■□□□□ 0.84
EXTL3-201ENST00000220562 PHACTR2O75167 634 aa20.31■□□□□ 0.84
EXTL3-201ENST00000220562 SMARCC2Q8TAQ2 1214 aa20.31■□□□□ 0.84
EXTL3-201ENST00000220562 RTL9Q8NET4 1388 aa20.31■□□□□ 0.84
EXTL3-201ENST00000220562 PSMA7O14818 248 aa20.31■□□□□ 0.84
EXTL3-201ENST00000220562 APOBRQ0VD83 1088 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms