RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 WDHD1O75717 1129 aaPredicted RBP11.88□□□□□ -0.51
VCL-201ENST00000211998 SLC5A1P13866 664 aa11.88□□□□□ -0.51
VCL-201ENST00000211998 TRIM21P19474 475 aaKnown RBP11.88□□□□□ -0.51
VCL-201ENST00000211998 CHMP4BP1P59074 171 aa11.88□□□□□ -0.51
VCL-201ENST00000211998 KANK3Q6NY19 840 aa11.88□□□□□ -0.51
VCL-201ENST00000211998 WAPLQ7Z5K2 1190 aa11.88□□□□□ -0.51
VCL-201ENST00000211998 ABCC5O15440 1437 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 WASLO00401 505 aaPredicted RBP11.87□□□□□ -0.51
VCL-201ENST00000211998 IFIT5Q13325 482 aaKnown RBP11.87□□□□□ -0.51
VCL-201ENST00000211998 DDX46Q7L014 1031 aaKnown RBP11.87□□□□□ -0.51
VCL-201ENST00000211998 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 MICAL1Q8TDZ2 1067 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 STMN4Q9H169 189 aaPredicted RBP11.87□□□□□ -0.51
VCL-201ENST00000211998 STIM2Q9P246 746 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 LUC7L2Q9Y383 392 aaKnown RBP11.87□□□□□ -0.51
VCL-201ENST00000211998 TTC14Q96N46 770 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 DNAI2Q9GZS0 605 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 EFCC1Q9HA90 598 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 CAPN7Q9Y6W3 813 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 MACROD2A1Z1Q3 448 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 DBF4Q9UBU7 674 aaPredicted RBP11.87□□□□□ -0.51
VCL-201ENST00000211998 GOLGA8BA8MQT2 603 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 PEX19P40855 299 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 GOLGA5Q8TBA6 731 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 TEX13AQ9BXU3 409 aaPredicted RBP11.87□□□□□ -0.51
VCL-201ENST00000211998 NAPBQ9H115 298 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 RNF41Q9H4P4 317 aaPredicted RBP11.87□□□□□ -0.51
VCL-201ENST00000211998 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 ANAPC15P60006 121 aa11.87□□□□□ -0.51
VCL-201ENST00000211998 KRT86O43790 486 aa11.86□□□□□ -0.51
VCL-201ENST00000211998 HPDP32754 393 aaPredicted RBP11.86□□□□□ -0.51
VCL-201ENST00000211998 SCAF11Q99590 1463 aaKnown RBP11.86□□□□□ -0.51
VCL-201ENST00000211998 ZNF75DP51815 510 aa11.86□□□□□ -0.51
VCL-201ENST00000211998 PNMA8AQ86V59 439 aaPredicted RBP11.86□□□□□ -0.51
VCL-201ENST00000211998 RNF168Q8IYW5 571 aaPredicted RBP11.86□□□□□ -0.51
VCL-201ENST00000211998 IFT74Q96LB3 600 aa11.86□□□□□ -0.51
VCL-201ENST00000211998 A6NNZ2 444 aa11.86□□□□□ -0.51
VCL-201ENST00000211998 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
VCL-201ENST00000211998 TUBB8Q3ZCM7 444 aa11.86□□□□□ -0.51
VCL-201ENST00000211998 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
VCL-201ENST00000211998 BAG1Q99933 345 aaPredicted RBP11.86□□□□□ -0.51
VCL-201ENST00000211998 MKNK2Q9HBH9 465 aa11.86□□□□□ -0.51
VCL-201ENST00000211998 PTCD1O75127 700 aaKnown RBP11.86□□□□□ -0.51
VCL-201ENST00000211998 KRT83P78385 493 aa11.86□□□□□ -0.51
VCL-201ENST00000211998 NME9Q86XW9 330 aa11.86□□□□□ -0.51
VCL-201ENST00000211998 CRACR2BQ8N4Y2 399 aaPredicted RBP11.86□□□□□ -0.51
VCL-201ENST00000211998 LIG3P49916 1009 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 SETDB1Q15047 1291 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 DZIP1Q86YF9 867 aaKnown RBP11.85□□□□□ -0.51
VCL-201ENST00000211998 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
VCL-201ENST00000211998 ANKRD18BA2A2Z9 1011 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 SMIM23A6NLE4 172 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 KIF3CO14782 793 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 ZBTB16Q05516 673 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 KCNG4Q8TDN1 519 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 CFAP57Q96MR6 1250 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 RAB34Q9BZG1 259 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 HOMER2Q9NSB8 354 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 MIS18AQ9NYP9 233 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 GRIN2AQ12879 1464 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 BRD2P25440 801 aaKnown RBP11.85□□□□□ -0.51
VCL-201ENST00000211998 IFI16Q16666 785 aaKnown RBP11.85□□□□□ -0.51
VCL-201ENST00000211998 CCDC82Q8N4S0 544 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 AMOTL2Q9Y2J4 779 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 RRP15Q9Y3B9 282 aaKnown RBP11.85□□□□□ -0.51
VCL-201ENST00000211998 RTL1A6NKG5 1358 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 TLDC2A0PJX2 215 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 KIF5AQ12840 1032 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 ESYT1Q9BSJ8 1104 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 SELENOOQ9BVL4 669 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 SPATS2LQ9NUQ6 558 aaKnown RBP11.85□□□□□ -0.51
VCL-201ENST00000211998 ORC3Q9UBD5 711 aaPredicted RBP11.85□□□□□ -0.51
VCL-201ENST00000211998 BAIAP2L1Q9UHR4 511 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 NPHP3Q7Z494 1330 aa11.85□□□□□ -0.51
VCL-201ENST00000211998 CEP85LQ5SZL2 805 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 IQCA1Q86XH1 822 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 SMC6Q96SB8 1091 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 LMBRD1Q9NUN5 540 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 GBP1P32455 592 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 MAP3K9P80192 1104 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 SSRP1Q08945 709 aaKnown RBP11.84□□□□□ -0.51
VCL-201ENST00000211998 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 USP16Q9Y5T5 823 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 PPP2R5AQ15172 486 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 ERCC6LQ2NKX8 1250 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 CACNA2D3Q8IZS8 1091 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 INTS4Q96HW7 963 aaKnown RBP11.84□□□□□ -0.51
VCL-201ENST00000211998 CABS1Q96KC9 395 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 VCXQ9H320 206 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 FAM114A2Q9NRY5 505 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 VIMP08670 466 aaKnown RBP11.84□□□□□ -0.51
VCL-201ENST00000211998 RBBP5Q15291 538 aaKnown RBP11.84□□□□□ -0.51
VCL-201ENST00000211998 RRAGBQ5VZM2 374 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 TRIM7Q9C029 511 aa11.84□□□□□ -0.51
VCL-201ENST00000211998 TRMT112Q9UI30 125 aaKnown RBP11.84□□□□□ -0.51
VCL-201ENST00000211998 DENND4BO75064 1496 aaPredicted RBP11.84□□□□□ -0.51
VCL-201ENST00000211998 WHAMMP3Q1A5X7 153 aa11.83□□□□□ -0.51
VCL-201ENST00000211998 TSNAXIP1Q2TAA8 658 aa11.83□□□□□ -0.51
VCL-201ENST00000211998 EVI5LQ96CN4 794 aa11.83□□□□□ -0.51
VCL-201ENST00000211998 TRIM47Q96LD4 638 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms