RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 CEP135Q66GS9 1140 aa12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 ERCC4Q92889 916 aaPredicted RBP12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 TRMT1Q9NXH9 659 aaKnown RBP12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 IGKV5-2P06315 115 aa12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 GUCY1B3Q02153 619 aa12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 PSME1Q06323 249 aa12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 NEXNQ0ZGT2 675 aa12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 SLC39A6Q13433 755 aa12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 MYD88Q99836 296 aa12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 USP27XA6NNY8 438 aa12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 CCT2P78371 535 aaKnown RBP12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 SCRN1Q12765 414 aa12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 V9GYY5 206 aaPredicted RBP12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 DDX46Q7L014 1031 aaKnown RBP12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 ZSCAN16Q9H4T2 348 aaPredicted RBP12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 PAXBP1Q9Y5B6 917 aa12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 CYP21A2P08686 494 aa12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 PIP4K2AP48426 406 aaPredicted RBP12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 CCDC73Q6ZRK6 1079 aa12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 LRRC8AQ8IWT6 810 aa12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 DBNLQ9UJU6 430 aaKnown RBP12.34□□□□□ -0.43
CX3CL1-201ENST00000006053 SKILP12757 684 aa12.33□□□□□ -0.44
CX3CL1-201ENST00000006053 TFCP2Q12800 502 aa12.33□□□□□ -0.44
CX3CL1-201ENST00000006053 IQCB1Q15051 598 aa12.33□□□□□ -0.44
CX3CL1-201ENST00000006053 AMOTQ4VCS5 1084 aa12.33□□□□□ -0.44
CX3CL1-201ENST00000006053 COL15A1P39059 1388 aa12.33□□□□□ -0.44
CX3CL1-201ENST00000006053 STX1AQ16623 288 aa12.33□□□□□ -0.44
CX3CL1-201ENST00000006053 TSGA10IPQ3SY00 556 aa12.33□□□□□ -0.44
CX3CL1-201ENST00000006053 KINO60870 393 aaKnown RBP12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 APOBRQ0VD83 1088 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 TAF3Q5VWG9 929 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 XAGE3Q8WTP9 111 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 FEZ1Q99689 392 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 GOLPH3LQ9H4A5 285 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 U3KPZ7 1027 aaPredicted RBP12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 ME1P48163 572 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 PTPN14Q15678 1187 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 USP28Q96RU2 1077 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 DBNDD2Q9BQY9 259 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 OGFRQ9NZT2 677 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 NEURL1BA8MQ27 555 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 TNNI3KQ59H18 835 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 USPL1Q5W0Q7 1092 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 PROSER2Q86WR7 435 aaPredicted RBP12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 NCOA5Q9HCD5 579 aaKnown RBP12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 CTNNA3Q9UI47 895 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 FPGT-TNNI3KV9GXZ4 949 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 KIF13AQ9H1H9 1805 aa12.32□□□□□ -0.44
CX3CL1-201ENST00000006053 ADGRL3Q9HAR2 1447 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 CAVIN2O95810 425 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 GCKRQ14397 625 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 FSIP1Q8NA03 581 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 PXDNQ92626 1479 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 UTYO14607 1347 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 PTPDC1A2A3K4 754 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 NPHP1O15259 732 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 ATP5JP18859 108 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 MCMDC2Q4G0Z9 681 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 STOX1Q6ZVD7 989 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 AOPEPQ8N6M6 819 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 ANKARQ7Z5J8 1434 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 CDC25BP30305 580 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 PDIA6Q15084 440 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.445e-6■□□□□ 9.6
CX3CL1-201ENST00000006053 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 KCNH5Q8NCM2 988 aa12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 NSUN7Q8NE18 718 aaKnown RBP12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 ZNF215Q9UL58 517 aaPredicted RBP12.31□□□□□ -0.44
CX3CL1-201ENST00000006053 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 CTAGE5O15320 804 aa12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 ANKRD24Q8TF21 1146 aa12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 MRFAP1L1Q96HT8 127 aa12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 ZNF609O15014 1411 aa12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 ADD1P35611 737 aaKnown RBP12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 UBE3BQ7Z3V4 1068 aa12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 NEUROD6Q96NK8 337 aa12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 SDF4Q9BRK5 362 aa12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 ANO10Q9NW15 660 aa12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 RCOR1Q9UKL0 485 aa12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
CX3CL1-201ENST00000006053 ATP5J2-PTCD1G3V325 749 aa12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 PTCD1O75127 700 aaKnown RBP12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 SYCP1Q15431 976 aa12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 SARM1Q6SZW1 724 aa12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 CHD2O14647 1828 aaKnown RBP12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 PFKFB2O60825 505 aa12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 PTPN12Q05209 780 aaKnown RBP12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 CEP57L1Q8IYX8 460 aa12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 SMARCC2Q8TAQ2 1214 aa12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms