RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 SMTNL1A8MU46 457 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 ATP5J2-PTCD1G3V325 749 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 KIF20AO95235 890 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 ME1P48163 572 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 COPS6Q7L5N1 327 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 CERS3Q8IU89 383 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 CABLES1Q8TDN4 633 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 SPATA32Q96LK8 384 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 USP21Q9UK80 565 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 PRR12Q9ULL5 1215 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 KDM6BO15054 1643 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 CCDC192P0DO97 292 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 HDAC1Q13547 482 aaPredicted RBP4.94□□□□□ -1.62
CFTR-201ENST00000003084 PDILTQ8N807 584 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 TESK2Q96S53 571 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 ACBD3Q9H3P7 528 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 FAM135BQ49AJ0 1406 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 GOLGA8AA7E2F4 631 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 GOLGA8BA8MQT2 603 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 ERVV-2B6SEH9 535 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 SMARCA5O60264 1052 aaPredicted RBP4.94□□□□□ -1.62
CFTR-201ENST00000003084 RANBP6O60518 1105 aaKnown RBP4.94□□□□□ -1.62
CFTR-201ENST00000003084 CDC25BP30305 580 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 MFSD6Q6ZSS7 791 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 TMTC2Q8N394 836 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 MARVELD3Q96A59 401 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 LRRC27Q9C0I9 530 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 CCNL1Q9UK58 526 aaPredicted RBP4.94□□□□□ -1.62
CFTR-201ENST00000003084 PPP1R12BO60237 982 aaPredicted RBP4.94□□□□□ -1.62
CFTR-201ENST00000003084 ATP2B3Q16720 1220 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 LINC01559Q495D7 138 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 FOXR1Q6PIV2 292 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 OGFOD1Q8N543 542 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 LINS1Q8NG48 757 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 NCOA7Q8NI08 942 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 TSG101Q99816 390 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 TNMDQ9H2S6 317 aa4.94□□□□□ -1.62
CFTR-201ENST00000003084 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.94□□□□□ -1.62
CFTR-201ENST00000003084 MAP3K19Q56UN5 1328 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 TTC41PQ6P2S7 1318 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 B4DLN1 442 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 IFIT3O14879 490 aaKnown RBP4.93□□□□□ -1.62
CFTR-201ENST00000003084 LMOD1P29536 600 aaPredicted RBP4.93□□□□□ -1.62
CFTR-201ENST00000003084 MATR3P43243 847 aaKnown RBP eCLIP4.93□□□□□ -1.62
CFTR-201ENST00000003084 TNNI2P48788 182 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 MRPL12P52815 198 aaKnown RBP4.93□□□□□ -1.62
CFTR-201ENST00000003084 ZNF772Q68DY9 489 aaPredicted RBP4.93□□□□□ -1.62
CFTR-201ENST00000003084 NFATC2IPQ8NCF5 419 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 PLBD2Q8NHP8 589 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 JDP2Q8WYK2 163 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 WNT2BQ93097 391 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 SLC10A4Q96EP9 437 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 BACH2Q9BYV9 841 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 GOLIM4O00461 696 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 FGFR1OPO95684 399 aaKnown RBP4.93□□□□□ -1.62
CFTR-201ENST00000003084 MRE11P49959 708 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 CCAR2Q8N163 923 aaKnown RBP4.93□□□□□ -1.62
CFTR-201ENST00000003084 CCDC87Q9NVE4 849 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 IRS4O14654 1257 aaPredicted RBP4.93□□□□□ -1.62
CFTR-201ENST00000003084 PRPF40AO75400 957 aaKnown RBP4.93□□□□□ -1.62
CFTR-201ENST00000003084 POTEJP0CG39 1038 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 IL13P35225 146 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 SSUH2Q9Y2M2 353 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 ATP7BP35670 1465 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 MAST3O60307 1309 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 GNAQP50148 359 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 HSP90AA2PQ14568 343 aaPredicted RBP4.93□□□□□ -1.62
CFTR-201ENST00000003084 TTC22Q5TAA0 569 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 PPFIBP1Q86W92 1011 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 RHPN1Q8TCX5 695 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 HOOK2Q96ED9 719 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 FEZ1Q99689 392 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 SLC52A2Q9HAB3 445 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 TET3O43151 1660 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 GNPATO15228 680 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 BAG6P46379 1132 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 ZHX3Q9H4I2 956 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.93□□□□□ -1.62
CFTR-201ENST00000003084 DENND2AQ9ULE3 1009 aa4.93□□□□□ -1.62
CFTR-201ENST00000003084 MEN1O00255 615 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 FIBPO43427 364 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 SLC39A6Q13433 755 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 BMP2KLQ5H9B9 411 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 PGBD3Q8N328 593 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 ERCC4Q92889 916 aaPredicted RBP4.92□□□□□ -1.62
CFTR-201ENST00000003084 ARGLU1Q9NWB6 273 aaPredicted RBP4.92□□□□□ -1.62
CFTR-201ENST00000003084 RTL9Q8NET4 1388 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 KIF1BO60333 1816 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 CCDC194A0A1B0GVG4 234 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 CALM1P0DP23 149 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 CALM2P0DP24 149 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 CALM3P0DP25 149 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 CYP7A1P22680 504 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 NLRP5P59047 1200 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 SCARF1Q14162 830 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 DPY19L2Q6NUT2 758 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 ANKRD44Q8N8A2 993 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 CNBD1Q8NA66 436 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 NLRP7Q8WX94 980 aa4.92□□□□□ -1.62
CFTR-201ENST00000003084 PDCL3Q9H2J4 239 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms