RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Polr2aP08775 1970 aaKnown RBP25.46■■□□□ 1.67
Ttc39b-201ENSMUST00000030205 Gm42688A0A0R3P9D1 673 aa25.46■■□□□ 1.67
Ttc39b-201ENSMUST00000030205 Ccdc142Q8CAI1 738 aa25.46■■□□□ 1.67
Ttc39b-201ENSMUST00000030205 Lama2Q60675 3118 aaKnown RBP25.46■■□□□ 1.67
Ttc39b-201ENSMUST00000030205 Terf1P70371 421 aa25.45■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Slc38a10Q5I012 1090 aa25.45■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 NexnQ7TPW1 607 aa25.45■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Sytl4Q9R0Q1 673 aa25.45■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Rbbp6P97868 1790 aaKnown RBP25.44■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Usp17lbE9Q9U0 468 aa25.44■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Cap1P40124 474 aa25.44■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Q3UJP5 209 aa25.44■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Abhd15Q5F2F2 459 aa25.44■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Smc4Q8CG47 1286 aa25.44■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Nectin2P32507 530 aa25.43■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Csrnp1P59054 583 aa25.43■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Gnat3Q3V3I2 354 aa25.43■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 WdpcpQ8C456 722 aa25.43■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 SisF8VQM5 1818 aa25.42■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Kifc2O08672 792 aa25.42■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Grm8P47743 908 aa25.42■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 GabreA2AMW3 916 aa25.41■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 LtbrP50284 415 aa25.41■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Hspa8P63017 646 aaKnown RBP25.41■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Evi5P97366 809 aa25.41■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Oog3Q3UWY1 500 aa25.41■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Large2Q5XPT3 690 aa25.41■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Ddx31Q6NZQ2 687 aaKnown RBP25.41■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Tmem143Q8VD26 458 aa25.41■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Glrx3Q9CQM9 337 aa25.41■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Prpmp5E9PXN1 296 aa25.4■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 OsbpQ3B7Z2 805 aa25.4■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Plekhm2Q80TQ5 1018 aa25.4■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Ccar1Q8CH18 1146 aaKnown RBP25.4■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Trappc12Q8K2L8 797 aa25.4■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Ndfip2Q91ZP6 311 aa25.4■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Peak1Q69Z38 1735 aa25.4■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 HunkO88866 714 aa25.39■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Anxa1P10107 346 aaKnown RBP25.39■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Ccdc51Q3URS9 406 aa25.39■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Tmco5bQ80X59 307 aa25.39■■□□□ 1.66
Ttc39b-201ENSMUST00000030205 Col3a1P08121 1464 aa25.39■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Znf18Q810A1 556 aa25.38■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Polr3glQ8R0C0 218 aa25.38■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Zcchc17Q9ESX4 241 aaKnown RBP25.38■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Mageb2A2AHM0 380 aa25.37■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Bin2D3Z6Q9 489 aa25.37■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Arrdc4A0A0B4J1F4 415 aa25.36■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Zmynd8A2A484 1235 aaKnown RBP25.36■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Nell2Q61220 819 aa25.36■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Cavin2Q63918 418 aaKnown RBP25.35■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Cog5Q8C0L8 829 aa25.35■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Mrpl12Q9DB15 201 aaKnown RBP25.35■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Sh3bp5Q9Z131 463 aa25.35■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Scn11aQ9R053 1765 aa25.35■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Brpf1B2RRD7 1212 aa25.34■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Mmp14P53690 582 aa25.34■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 GpkowQ56A08 488 aa25.34■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Prg3Q9JL95 222 aa25.34■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Pde4aO89084 844 aa25.33■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Casp1P29452 402 aa25.33■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Irf6P97431 467 aa25.33■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 G3bp1P97855 465 aaKnown RBP25.33■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 MarsQ68FL6 902 aaKnown RBP25.33■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Lman1lQ8VCD3 505 aa25.33■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Plekho1Q9JIY0 408 aa25.33■■□□□ 1.65
Ttc39b-201ENSMUST00000030205 Ccdc171E9Q1U1 1324 aa25.33■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Gpr182P43142 395 aa25.32■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 EspnlQ3UYR4 1005 aa25.32■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Tll1Q62381 1013 aa25.32■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Fchsd1Q6PFY1 688 aa25.32■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Pxylp1Q8BHA9 480 aa25.32■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Osbpl5Q9ER64 874 aa25.32■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Gtf2iQ9ESZ8 998 aaKnown RBP25.32■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Znfx1Q8R151 1909 aaKnown RBP25.31■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Wnt10bP48614 389 aa25.31■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Jarid2Q62315 1234 aa25.31■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 LdhdQ7TNG8 484 aa25.31■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Slain1Q68FF7 579 aa25.3■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Mxd3Q80US8 206 aa25.3■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Kbtbd13Q8C828 458 aa25.3■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Sirt2Q8VDQ8 389 aa25.3■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Sh3bp5lQ99LH9 392 aa25.3■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Rbm33Q9CXK9 1231 aaKnown RBP25.3■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Mkrn1Q9QXP6 481 aa25.3■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Prl3d2F6R3P9 224 aa25.29■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Akap4Q60662 849 aa25.29■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Foxd1Q61345 456 aa25.29■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Nlrp9bQ66X22 1003 aa25.29■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Bms1Q6PGF5 1284 aaKnown RBP25.29■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Hdac9Q99N13 588 aa25.29■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 InsrrQ9WTL4 1300 aa25.29■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Tpx2A2APB8 745 aaKnown RBP25.28■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 GabrdP22933 449 aa25.28■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Mansc4Q3UU94 337 aa25.28■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Ric3Q8BPM6 367 aa25.28■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Ddx20Q9JJY4 825 aaKnown RBP25.28■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Eif3aP23116 1344 aaKnown RBP25.28■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 Ifi207E9Q3L4 978 aa25.27■■□□□ 1.64
Ttc39b-201ENSMUST00000030205 VgfQ0VGU4 617 aa25.27■■□□□ 1.64
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms