RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 C3orf33Q6P1S2 294 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 ASB18Q6ZVZ8 466 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 LRRTM1Q86UE6 522 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 WDFY1Q8IWB7 410 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 FADS6Q8N9I5 356 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 OR2Y1Q8NGV0 311 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 OR10AC1Q8NH08 325 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 ABHD6Q9BV23 337 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 SMOC1Q9H4F8 434 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 RABL2AQ9UBK7 228 aaPredicted RBP17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 POU2F3Q9UKI9 436 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 RABL2BQ9UNT1 228 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 HS3ST3B1Q9Y662 390 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 FREM3P0C091 2139 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 ARPC4-TTLL3A0A0A6YYG9 625 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 TEX51A0A1B0GUA7 166 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 LDOC1O95751 146 aaPredicted RBP17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 CELA2AP08217 269 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 ADRA2CP18825 462 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 ACP1P24666 158 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 SLC6A1P30531 599 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 DDOSTP39656 456 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 EIF2B1Q14232 305 aaKnown RBP17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 ESPNLQ6ZVH7 1005 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 KRT77Q7Z794 578 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 CMTM4Q8IZR5 234 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 WDSUB1Q8N9V3 476 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 SLC26A10Q8NG04 563 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 OR51A4Q8NGJ6 313 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 M1APQ8TC57 530 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 THRSPQ92748 146 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 YIPF5Q969M3 257 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 TMEM106AQ96A25 262 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 UPRTQ96BW1 309 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 ST6GAL2Q96JF0 529 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 ABCG5Q9H222 651 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 ARRDC1-AS1Q9H2J1 176 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 LIN7BQ9HAP6 207 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 MED29Q9NX70 200 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 SLC39A1Q9NY26 324 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 CACNA1CQ13936 2221 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 CTDSPLO15194 276 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 MPZL1O95297 269 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 HLA-DMAP28067 261 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 FMODQ06828 376 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 TATDN3Q17R31 274 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 SLC36A2Q495M3 483 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 ATAD3CQ5T2N8 411 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 OR52N5Q8NH56 324 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 SLC7A6Q92536 515 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 MCHR2Q969V1 340 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 LOXL4Q96JB6 756 aa17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 RPH3AQ9Y2J0 694 aaPredicted RBP17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 MRPS7Q9Y2R9 242 aaKnown RBP17.66■□□□□ 0.42
PCDHB11-202ENST00000624887 TRABD2BA6NFA1 517 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 PNPP00491 289 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 CALCBP10092 127 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 RIDAP52758 137 aaKnown RBP17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 PCK2Q16822 640 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 TMEM81Q6P7N7 255 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 OPN5Q6U736 354 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 NHLRC1Q6VVB1 395 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 ADPRHL1Q8NDY3 354 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 OR4K17Q8NGC6 315 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 SLC25A38Q96DW6 304 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 ZFP3Q96NJ6 502 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 CMKLR1Q99788 373 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 PTGES2Q9H7Z7 377 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 B3GAT1Q9P2W7 334 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 CACNG2Q9Y698 323 aa17.65■□□□□ 0.42
PCDHB11-202ENST00000624887 TRAV8-7A0A075B6U6 113 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 B4E171 279 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 GSTZ1O43708 216 aaPredicted RBP17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 ADRB1P08588 477 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 ADH6P28332 368 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 TSPAN7P41732 249 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 C19orf57Q0VDD7 668 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 ODF4Q2M2E3 257 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 TBRG1Q3YBR2 411 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 FCRLAQ7L513 359 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 CREB3L1Q96BA8 519 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 LRP12Q9Y561 859 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 PCDHGA5Q9Y5G8 931 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 ORC5O43913 435 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 KHDRBS3O75525 346 aaKnown RBP17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 ZNF883P0CG24 379 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 ZNF823P16415 610 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 EIF1P41567 113 aaKnown RBP17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 AGFG1P52594 562 aaKnown RBP17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 CLDN12P56749 244 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 DGCR2P98153 550 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 IFITM2Q01629 132 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 PLA1AQ53H76 456 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 PRAMEF20Q5VT98 475 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 THOC7Q6I9Y2 204 aaKnown RBP17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 OR7E24Q6IFN5 339 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 DBX2Q6ZNG2 339 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 KRT74Q7RTS7 529 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 UBASH3BQ8TF42 649 aa17.64■□□□□ 0.41
PCDHB11-202ENST00000624887 ZNF486Q96H40 463 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms