RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 FEN1P39748 380 aaKnown RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 MAGEA2P43356 314 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 CDK9P50750 372 aaKnown RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 IL1RL1Q01638 556 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 ACY1Q03154 408 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 MERTKQ12866 999 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 SRSF5Q13243 272 aaKnown RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 IL18R1Q13478 541 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 SERTAD2Q14140 314 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 FAM53BQ14153 422 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 ANGPT1Q15389 498 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 CEBPEQ15744 281 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 CLPPQ16740 277 aaPredicted RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 DEFB110Q30KQ9 67 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 TCTEX1D4Q5JR98 221 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 MFSD4BQ5TF39 518 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 ZCCHC12Q6PEW1 402 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 SHQ1Q6PI26 577 aaKnown RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 TTC33Q6PID6 262 aaPredicted RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 WDR74Q6RFH5 385 aaPredicted RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 PIWIL3Q7Z3Z3 882 aaKnown RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 PRSS42Q7Z5A4 293 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 C17orf82Q86X59 251 aaPredicted RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 PEX5LQ8IYB4 626 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 C8orf59Q8N0T1 100 aaPredicted RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 LINC00471Q8N535 108 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 Q8N9G6 341 aaPredicted RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 CDRT4Q8N9R6 151 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 OR9A2Q8NGT5 310 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 OR4C6Q8NH72 309 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 MIPOL1Q8TD10 442 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 ZNF675Q8TD23 568 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 RMND5BQ96G75 393 aaPredicted RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 RBM18Q96H35 190 aaKnown RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 DGAT2Q96PD7 388 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 ZNF300Q96RE9 604 aaPredicted RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 MAP3K3Q99759 626 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 APOL4Q9BPW4 351 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 MRPS26Q9BYN8 205 aaKnown RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 ANKRD60Q9BZ19 345 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 GABARAPL1Q9H0R8 117 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 ING2Q9H160 280 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 SYNDIG1Q9H7V2 258 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 IL1RAPQ9NPH3 570 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 EQTNQ9NQ60 294 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 PRTFDC1Q9NRG1 225 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 KRT84Q9NSB2 600 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 USE1Q9NZ43 259 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 AKAP7Q9P0M2 348 aaPredicted RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 C5AR2Q9P296 337 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 PILRBQ9UKJ0 227 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 CES1P1Q9UKY3 287 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 BLOC1S6Q9UL45 172 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 IFT52Q9Y366 437 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 SAMHD1Q9Y3Z3 626 aaKnown RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 SLCO1B1Q9Y6L6 691 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 KNL1Q8NG31 2342 aa4.17□□□□□ -1.74
VPS29-212ENST00000621131 MN1Q10571 1320 aaPredicted RBP4.17□□□□□ -1.74
VPS29-212ENST00000621131 ZFHX3Q15911 3703 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 A0A0A6YYC8 382 aaPredicted RBP4.16□□□□□ -1.74
VPS29-212ENST00000621131 A0A1B0GTQ1 180 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 MEX3AA1L020 520 aaKnown RBP4.16□□□□□ -1.74
VPS29-212ENST00000621131 ZNF860A6NHJ4 632 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 C4orf51C9J302 202 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 H0YIG0 161 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 I3L1I5 382 aaPredicted RBP4.16□□□□□ -1.74
VPS29-212ENST00000621131 SGK494L7N484 410 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 M0QX08 132 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 PDLIM1O00151 329 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 TNFRSF11BO00300 401 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 HMGN4O00479 90 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 AP3D1O14617 1153 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 PGRMC2O15173 223 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 ZNF749O43361 778 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 CHST10O43529 356 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 SSX4O60224 188 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 CTNSO60931 367 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 SRSF10O75494 262 aaKnown RBP4.16□□□□□ -1.74
VPS29-212ENST00000621131 UGT2B17O75795 530 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 CCNB2O95067 398 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 GADD45GO95257 159 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 PGM3O95394 542 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 OXSR1O95747 527 aaPredicted RBP4.16□□□□□ -1.74
VPS29-212ENST00000621131 OPN1SWP03999 348 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 IFNA16P05015 189 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 ATP1B1P05026 303 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 HMGN2P05204 90 aaKnown RBP4.16□□□□□ -1.74
VPS29-212ENST00000621131 LYNP07948 512 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 SLC35E2P0CK97 266 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 SMIM10L1P0DMW3 83 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 ANXA8P13928 327 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 ETS2P15036 469 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 TNNI3P19429 210 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 IFNGR2P38484 337 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 PSMD4P55036 377 aaKnown RBP4.16□□□□□ -1.74
VPS29-212ENST00000621131 CASP9P55211 416 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 GFERP55789 205 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 SH3BGRP55822 239 aaPredicted RBP4.16□□□□□ -1.74
VPS29-212ENST00000621131 HSD17B7P56937 341 aa4.16□□□□□ -1.74
VPS29-212ENST00000621131 OR1D5P58170 312 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms