RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 LPAR2Q9HBW0 351 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 G6PC2Q9NQR9 355 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 MRGBPQ9NV56 204 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 PLSCR5A0PG75 271 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 H3BSA7 217 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 WNT9BO14905 357 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 TPD52L2O43399 206 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 MPZL1O95297 269 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 IFNA14P01570 189 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 MMP7P09237 267 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 THRBP10828 461 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 ACADSP16219 412 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 FUT1P19526 365 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 EPHA1P21709 976 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 GCH1P30793 250 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 PCGF2P35227 344 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 GUCA1AP43080 201 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 ACTG1P63261 375 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 METTL21CQ5VZV1 264 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 PEG10Q86TG7 708 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 RETREG3Q86VR2 466 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 ALDH16A1Q8IZ83 802 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 LRRC17Q8N6Y2 441 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 C3orf56Q8N813 242 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 DYDC1Q8WWB3 177 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 SAP30LQ9HAJ7 183 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 CCNB1IP1Q9NPC3 277 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 INIPQ9NRY2 104 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 BAG5Q9UL15 447 aa15.19■□□□□ 0.02
SHKBP1-227ENST00000602011 PPIAL4EA0A075B759 164 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 PPIAL4CA0A0B4J2A2 164 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 PPIAL4DF5H284 164 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 PLPP2O43688 288 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 CDC14BO60729 498 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 THY1P04216 161 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 ADH4P08319 380 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 PPIAL4FP0DN26 164 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 TUBG1P23258 451 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 FPR2P25090 351 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 ZNF81P51508 661 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 UGT2B15P54855 530 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 CYLC2Q14093 348 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 MELKQ14680 651 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 ZMAT1Q5H9K5 638 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 C1QL2Q7Z5L3 287 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 PAQR4Q8N4S7 273 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 NOXO1Q8NFA2 376 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 OR1J1Q8NGS3 322 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 SIKE1Q9BRV8 207 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 WACQ9BTA9 647 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 NANOGQ9H9S0 305 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 NTN4Q9HB63 628 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 TUBG2Q9NRH3 451 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 ZDHHC8Q9ULC8 765 aa15.18■□□□□ 0.02
SHKBP1-227ENST00000602011 MEGF8Q7Z7M0 2845 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 KCNAB3O43448 404 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 TRMUO75648 421 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 OR5F1O95221 314 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 OPN1SWP03999 348 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 STOMP27105 288 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 IFNA8P32881 189 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 PCBD1P61457 104 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 MVKQ03426 396 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 RPL18Q07020 188 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 NFYCQ13952 458 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 VMACQ2NL98 169 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 ALKBH6Q3KRA9 238 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 DCAF12L2Q5VW00 463 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 MBNL2Q5VZF2 373 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 ARL9Q6T311 187 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 THSD4Q6ZMP0 1018 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 USP51Q70EK9 711 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 ZER1Q7Z7L7 766 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 RBM45Q8IUH3 476 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 VANGL1Q8TAA9 524 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 ASB10Q8WXI3 467 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 SGTBQ96EQ0 304 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 RBP7Q96R05 134 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 ZNF347Q96SE7 839 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 PRSS27Q9BQR3 290 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 MEPEQ9NQ76 525 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 WIPI2Q9Y4P8 454 aa15.17■□□□□ 0.02
SHKBP1-227ENST00000602011 KPNA4O00629 521 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 ICMTO60725 284 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 DEAF1O75398 565 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 OR7A10O76100 309 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 NPPAP01160 153 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 IGHV2-5P01817 119 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 TSPAN19P0C672 248 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 CCL2P13500 99 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 GDI2P50395 445 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 MTPNP58546 118 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 PABPC1L2AQ5JQF8 200 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 THEM4Q5T1C6 240 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 FAM27BQ5VT28 67 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 OR4D11Q8NGI4 311 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 OR10A6Q8NH74 314 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 TAMM41Q96BW9 452 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 ALG12Q9BV10 488 aa15.16■□□□□ 0.02
SHKBP1-227ENST00000602011 ELOVL3Q9HB03 270 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms