RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 TTC19Q6DKK2 380 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR4A47Q6IF82 309 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZYG11AQ6WRX3 759 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 C16orf47Q6ZP98 133 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 Q6ZRP5 223 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 GPRIN3Q6ZVF9 776 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 COMMD6Q7Z4G1 85 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 FBXW8Q8N3Y1 598 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 TMEM251Q8N6I4 163 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR10Q1Q8NGQ4 319 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 AGAP11Q8TF27 550 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 SMAP2Q8WU79 429 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 SPSB1Q96BD6 273 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 PPWD1Q96BP3 646 aaKnown RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 CNRIP1Q96F85 164 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 C4orf45Q96LM5 186 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF681Q96N22 645 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 TMEM237Q96Q45 408 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 NKX3-1Q99801 234 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 RHOXF2Q9BQY4 288 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 PIGQQ9BRB3 760 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 FAIM2Q9BWQ8 316 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 ANGPTL4Q9BY76 406 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 TTTY12Q9BZ98 90 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 WWTR1Q9GZV5 400 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 UBQLN3Q9H347 655 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 RABEP2Q9H5N1 569 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 GSN-AS1Q9NRJ2 163 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 FARSBQ9NSD9 589 aaKnown RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 TEX10Q9NXF1 929 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 TAS2R7Q9NYW3 318 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 MAT2BQ9NZL9 334 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 EMCNQ9ULC0 261 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 PPP1R3CQ9UQK1 317 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 ERVK-19Q9WJR5 959 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 CCL27Q9Y4X3 112 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 CHCHD2Q9Y6H1 151 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 FREM1Q5H8C1 2179 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TRGV5A0A0B4J1U4 118 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TRAV24A0A0B4J272 114 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 A0A0G2JMM0 328 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 A0A0J9YWU9 116 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 A0A1W2PPB8 328 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 A0A1W2PRS3 328 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR6C70A6NIJ9 312 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 KIR3DP1A8MWS1 328 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 SNURFLB1AK76 121 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 GOLGA8RI6L899 631 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 UBFD1O14562 309 aaKnown RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 SNX3O60493 162 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TBX19O60806 448 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 GBAP04062 536 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 SHBGP04278 402 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 HPNP05981 417 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 CT62P0C5K7 136 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 CCL3P10147 92 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 UROSP10746 265 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 MYL2P10916 166 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 GABRA1P14867 456 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 CPA3P15088 417 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TSPAN8P19075 237 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 NT5EP21589 574 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 GPX3P22352 226 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 ELAVL4P26378 380 aaKnown RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 HTR1EP28566 365 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 HMOX2P30519 316 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TIA1P31483 386 aaKnown RBP eCLIP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 MPIP34949 423 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 DEKP35659 375 aaKnown RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 OPRL1P41146 370 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 CASP3P42574 277 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 MAGEA5P43359 124 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 DNASE1L1P49184 302 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 EMDP50402 254 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 NAGLUP54802 743 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 CSNK2BP67870 215 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 PLGLB1Q02325 96 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TRAP1Q12931 704 aaKnown RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 KIAA0040Q15053 153 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF74Q16587 644 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 NHSL2Q5HYW2 709 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TCHHL1Q5QJ38 904 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TEX35Q5T0J7 233 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 WLSQ5T9L3 541 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 EMBQ6PCB8 327 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF613Q6PF04 617 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 FAM47EQ6ZV65 393 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 IL17RELQ6ZVW7 336 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 RPS27LQ71UM5 84 aaKnown RBP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 BANPQ8N9N5 519 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR7A2PQ8NGA2 310 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 LILRB4Q8NHJ6 448 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 NEIL3Q8TAT5 605 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 SPPL2AQ8TCT8 520 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 C16orf78Q8WTQ4 265 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 GATAD1Q8WUU5 269 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 RNF138Q8WVD3 245 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 PROX1Q92786 737 aa3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 TAF15Q92804 592 aaKnown RBP eCLIP3.03□□□□□ -1.92
CKS1BP3-201ENST00000600888 HGDQ93099 445 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms