RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	RNF121	Q9H920	327 aa		11.65	□□□□□ -0.54
ARHGEF1-222	ENST00000600517	NRIP3	Q9NQ35	241 aa		11.65	□□□□□ -0.54
ARHGEF1-222	ENST00000600517	ADAM18	Q9Y3Q7	739 aa		11.65	□□□□□ -0.54
ARHGEF1-222	ENST00000600517	HEATR1	Q9H583	2144 aa	Known RBP	11.65	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SLC22A23	A1A5C7	686 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SSX4	O60224	188 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	KRT36	O76013	467 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	MMP7	P09237	267 aa	Predicted RBP	11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	RRM2	P31350	389 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	CDA	P32320	146 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	MAGEA2	P43356	314 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	FXYD6P3	P58550	94 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	DAG1	Q14118	895 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SGCA	Q16586	387 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	GPR139	Q6DWJ6	353 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	TMEM53	Q6P2H8	277 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	VHLL	Q6RSH7	139 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	DPY19L2P2	Q6ZN68	376 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	FOXL2NB	Q6ZUU3	175 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	LRRC18	Q8N456	261 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	NSMAF	Q92636	917 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	DOK1	Q99704	481 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SMR3A	Q99954	134 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	C1orf198	Q9H425	327 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	PLK3	Q9H4B4	646 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	MAGIX	Q9H6Y5	334 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	TMCC3	Q9ULS5	477 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SPEF1	Q9Y4P9	236 aa		11.64	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	ZAN	Q9Y493	2812 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	TMEM129	A0AVI4	362 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	XKRY	O14609	159 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	OR10H3	O60404	316 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	UBOX5	O94941	541 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	F12	P00748	615 aa	Predicted RBP	11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	FPR3	P25089	353 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SDHA	P31040	664 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	GLRX	P35754	106 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	IFNGR2	P38484	337 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	EFNA4	P52798	201 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SNRPD2	P62316	118 aa	Known RBP	11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SNTB2	Q13425	540 aa	Known RBP	11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	MEST	Q5EB52	335 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	KRT80	Q6KB66	452 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	C1orf94	Q6P1W5	598 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SMARCD3	Q6STE5	483 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	THSD4	Q6ZMP0	1018 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SLC30A7	Q8NEW0	376 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	ASB9	Q96DX5	294 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	THTPA	Q9BU02	230 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	TRIM15	Q9C019	465 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	KCNN2	Q9H2S1	579 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	FBXO9	Q9UK97	447 aa	Predicted RBP	11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	CMAHP	Q9Y471	501 aa		11.63	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	IQCM	A0A1B0GVH7	501 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	PRSS37	A4D1T9	235 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	FAM171A2	A8MVW0	826 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	ACOT8	O14734	319 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SMAD7	O15105	426 aa	Known RBP	11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	TXNDC12	O95881	172 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	PTH	P01270	115 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	CST2	P09228	141 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	APEH	P13798	732 aa	Known RBP	11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	GUCA1A	P43080	201 aa	Predicted RBP	11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	GSS	P48637	474 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	EVX1	P49640	407 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	NUDT6	P53370	316 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	DSCR9	P59020	149 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	GALK2	Q01415	458 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	PLP2	Q04941	152 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	TRAP1	Q12931	704 aa	Known RBP	11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	RFX4	Q33E94	735 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	PGM2L1	Q6PCE3	622 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	LINC00471	Q8N535	108 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	OR1J2	Q8NGS2	313 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	CLPTM1L	Q96KA5	538 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	ZNF570	Q96NI8	536 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	RHNO1	Q9BSD3	238 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	REG4	Q9BYZ8	158 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	IL20RA	Q9UHF4	553 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	IER3IP1	Q9Y5U9	82 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	LYVE1	Q9Y5Y7	322 aa		11.62	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	NSD1	Q96L73	2696 aa	Predicted RBP	11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	TEX13C	A0A0J9YWL9	993 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517		H7C1C5	153 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	TNFRSF11B	O00300	401 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	IMPA2	O14732	288 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	ARPC3	O15145	178 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	SNAP29	O95721	258 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	LY6G6D	O95868	133 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	ZNF32	P17041	273 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	MSR1	P21757	451 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	LAP3	P28838	519 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	PPOX	P50336	477 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	RIPPLY3	P57055	190 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	LCN6	P62502	163 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	PSG4	Q00888	419 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	TSPAN31	Q12999	210 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	KRR1	Q13601	381 aa	Known RBP	11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	MSMP	Q1L6U9	139 aa		11.61	□□□□□ -0.55
ARHGEF1-222	ENST00000600517	FAM98B	Q52LJ0	330 aa	Known RBP	11.61	□□□□□ -0.55

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