RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CEACAM16Q2WEN9 425 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 ALG10Q5BKT4 473 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 LIPNQ5VXI9 398 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 TBPL2Q6SJ96 375 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 PIWIL3Q7Z3Z3 882 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 ZDHHC21Q8IVQ6 265 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 DHRS1Q96LJ7 313 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 BTBD10Q9BSF8 475 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 GLTPQ9NZD2 209 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 TMCC3Q9ULS5 477 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 AURKCQ9UQB9 309 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 HEATR1Q9H583 2144 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 TMEM129A0AVI4 362 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 LRP5LA4QPB2 252 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 ZNF99A8MXY4 864 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 KRT36O76013 467 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 DIRAS1O95057 198 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 CELA3BP08861 270 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 NR2C1P13056 603 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 ATP6V1B2P21281 511 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 IFNGR2P38484 337 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 CLRN1P58418 232 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 SPIBQ01892 262 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 MYPOPQ86VE0 399 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 ZNF786Q8N393 782 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 SVOPLQ8N434 492 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 RFLNBQ8N5W9 214 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 IL17RDQ8NFM7 739 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 OR52J3Q8NH60 311 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 MOSPD2Q8NHP6 518 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 TMEM54Q969K7 222 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 C1orf159Q96HA4 380 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 SEPHS2Q99611 448 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 TXNIPQ9H3M7 391 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 MAGIXQ9H6Y5 334 aa15.14■□□□□ 0.01
SHKBP1-203ENST00000594298 IGHV2OR16-5A0A0B4J2B6 119 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 HAX1O00165 279 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 LILRA1O75019 489 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 IGFBP1P08833 259 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 HOXB6P17509 224 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 MS4A2Q01362 244 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 BNIP1Q12981 228 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 RIN1Q13671 783 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 MELKQ14680 651 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 ZBED5Q49AG3 693 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 FAM98BQ52LJ0 330 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 MALRD1Q5VYJ5 2156 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 UGT2A3Q6UWM9 527 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 LINC01356Q8N9X3 169 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 OR4K5Q8NGD3 323 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 OR51A7Q8NH64 312 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 ANK2Q01484 3957 aa15.13■□□□□ 0.01
SHKBP1-203ENST00000594298 TRBV4-1A0A0J9YWV2 114 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 TCRBV5S2A0A599 114 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 ZNF503-AS2A6NEH8 195 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 DNAJC8O75937 253 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 ACADSP16219 412 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 FUT4P22083 530 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 APEX1P27695 318 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 IL2RGP31785 369 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 CTXN1P60606 82 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 PHYHD1Q5SRE7 291 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 FAM205BPQ63HN1 556 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 MDP1Q86V88 176 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 ZCCHC24Q8N2G6 241 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 LINC00471Q8N535 108 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 FNDC8Q8TC99 324 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 ASB10Q8WXI3 467 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 CCDC124Q96CT7 223 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 SLC7A6OSQ96CW6 309 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 ZNF837Q96EG3 531 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 CLPTM1LQ96KA5 538 aa15.12■□□□□ 0.01
SHKBP1-203ENST00000594298 TRAV27A0A087WT01 109 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 SH3PXD2BA1X283 911 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 A6NIZ1 184 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 AQP12BA6NM10 295 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 DHHO43323 396 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 TCF21O43680 179 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 PGA4P0DJD7 388 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 PGA3P0DJD8 388 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 RRM2P31350 389 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 RPL4P36578 427 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 GPR4P46093 362 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 CAPZA2P47755 286 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 EVX1P49640 407 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 ZNF84P51523 738 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 CDH15P55291 814 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 RAP1BP61224 184 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 RPL27P61353 136 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 RAP1AP62834 184 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 ARMC4Q5T2S8 1044 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 ZNF813Q6ZN06 617 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 ZNF627Q7L945 461 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 AQP12AQ8IXF9 295 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 OR13C2Q8NGS9 318 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 UBASH3BQ8TF42 649 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 FAM46AQ96IP4 442 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 FOXB1Q99853 325 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 NOX3Q9HBY0 568 aa15.11■□□□□ 0.01
SHKBP1-203ENST00000594298 DYNLRB1Q9NP97 96 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms