RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 LRRC18Q8N456 261 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 ZNF525Q8N782 197 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 SORCS2Q96PQ0 1159 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 RBP7Q96R05 134 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 IL1RAPQ9NPH3 570 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 CR1P17927 2039 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 NAV3Q8IVL0 2385 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 HIVEP2P31629 2446 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 ANK3Q12955 4377 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 A0A096LNT2 108 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 A6NIZ1 184 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 RPL4P36578 427 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 RAP1BP61224 184 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 RAP1AP62834 184 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 SLC36A2Q495M3 483 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 TMEM53Q6P2H8 277 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 THSD4Q6ZMP0 1018 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 SVOPLQ8N434 492 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 PAQR4Q8N4S7 273 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 FNDC8Q8TC99 324 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 Q96M85 177 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 RHNO1Q9BSD3 238 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 RNF121Q9H920 327 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 ACTR3BQ9P1U1 418 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 CMAHPQ9Y471 501 aa15.94■□□□□ 0.14
SHKBP1-202ENST00000593764 VSTM5A8MXK1 200 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 H7C1C5 153 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 GADD45GO95257 159 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 FABP3P05413 133 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 NR2C1P13056 603 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 CCL2P13500 99 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 ATP6V1B2P21281 511 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 CALB2P22676 271 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 GLRXP35754 106 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 PPOXP50336 477 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 SMIM11AP58511 58 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 DSCR9P59020 149 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 LCN6P62502 163 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 SGCAQ16586 387 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 FAM27BQ5VT28 67 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 CYP2R1Q6VVX0 501 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 FOXL2NBQ6ZUU3 175 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 ZER1Q7Z7L7 766 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 CPEB3Q8NE35 698 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 SLC30A7Q8NEW0 376 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 POM121Q96HA1 1249 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 RSRC1Q96IZ7 334 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 GPX7Q96SL4 187 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 VRK1Q99986 396 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 NRIP3Q9NQ35 241 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 GRHPRQ9UBQ7 328 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 SPEF1Q9Y4P9 236 aa15.93■□□□□ 0.14
SHKBP1-202ENST00000593764 SLC22A23A1A5C7 686 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 NDUFB2O95178 105 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 SCG5P05408 212 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 SPIBQ01892 262 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 MESTQ5EB52 335 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 CLEC2AQ6UVW9 174 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 ZDHHC21Q8IVQ6 265 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 ARHGAP24Q8N264 748 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 ZCCHC24Q8N2G6 241 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 MRPL24Q96A35 216 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 MCUR1Q96AQ8 359 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 MRPL37Q9BZE1 423 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 IL20RAQ9UHF4 553 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 AURKCQ9UQB9 309 aa15.92■□□□□ 0.14
SHKBP1-202ENST00000593764 TCRBV5S2A0A599 114 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 PRSS37A4D1T9 235 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 UNC119BA6NIH7 251 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 ZNF32P17041 273 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 RRM2P31350 389 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 EVX1P49640 407 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 MS4A2Q01362 244 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 GALK2Q01415 458 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 PABPC1L2AQ5JQF8 200 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 LRP11Q86VZ4 500 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 C10orf105Q8TEF2 133 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 FAM168AQ92567 244 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 RASD2Q96D21 266 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 ZNF570Q96NI8 536 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 C1orf198Q9H425 327 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 TAS2R1Q9NYW7 299 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 SLC7A8Q9UHI5 535 aa15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 FBXO9Q9UK97 447 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-202ENST00000593764 TEX13CA0A0J9YWL9 993 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 IMPA2O14732 288 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 AHCYL1O43865 530 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 SNAP29O95721 258 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 PTHP01270 115 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 APEX1P27695 318 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 LAP3P28838 519 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 SDHAP31040 664 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 HMGA2P52926 109 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 PSG4Q00888 419 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 PLP2Q04941 152 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 TRIM25Q14258 630 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 DPY19L2P2Q6ZN68 376 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 KCNN2Q9H2S1 579 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 CCNB1IP1Q9NPC3 277 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 KRCC1Q9NPI7 259 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms