RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TMEM176BQ3YBM2 270 aaPredicted RBP9.31□□□□□ -0.92
VPS25-203ENST00000589520 TRIQKQ629K1 86 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 TMEM225Q6GV28 225 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 PYHIN1Q6K0P9 492 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 MZT2BQ6NZ67 158 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 CCBE1Q6UXH8 406 aaPredicted RBP9.31□□□□□ -0.92
VPS25-203ENST00000589520 LRRN1Q6UXK5 716 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 NHLRC1Q6VVB1 395 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 TIPARPQ7Z3E1 657 aaKnown RBP9.31□□□□□ -0.92
VPS25-203ENST00000589520 KRT77Q7Z794 578 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 GLRX5Q86SX6 157 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 SNX29P2Q8IUI4 249 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 GLB1L2Q8IW92 636 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 RFLNBQ8N5W9 214 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 ZNF676Q8N7Q3 588 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 DRAXINQ8NBI3 349 aaPredicted RBP9.31□□□□□ -0.92
VPS25-203ENST00000589520 NLGN4YQ8NFZ3 816 aaPredicted RBP9.31□□□□□ -0.92
VPS25-203ENST00000589520 OR10H5Q8NGA6 315 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 CHAC2Q8WUX2 184 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 SLC25A44Q96H78 314 aaPredicted RBP9.31□□□□□ -0.92
VPS25-203ENST00000589520 MAP6Q96JE9 813 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 DERL3Q96Q80 235 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 PDCD1LG2Q9BQ51 273 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 EDEM2Q9BV94 578 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 MRPL13Q9BYD1 178 aaKnown RBP9.31□□□□□ -0.92
VPS25-203ENST00000589520 ELOVL3Q9HB03 270 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 TCF7L1Q9HCS4 588 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 TIGARQ9NQ88 270 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 FRRS1LQ9P0K9 344 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 ABI3Q9P2A4 366 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 DKKL1Q9UK85 242 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 FBXL2Q9UKC9 423 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 SPATA2Q9UM82 520 aa9.31□□□□□ -0.92
VPS25-203ENST00000589520 COA3Q9Y2R0 106 aaPredicted RBP9.31□□□□□ -0.92
VPS25-203ENST00000589520 A0A0G2JK05 382 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 TEX51A0A1B0GUA7 166 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 B4DXG7 233 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 C9orf172C9J069 976 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 NCR1O76036 304 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 RPP14O95059 124 aaKnown RBP9.3□□□□□ -0.92
VPS25-203ENST00000589520 HNRNPCP07910 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS25-203ENST00000589520 SPARCP09486 303 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 CSF3P09919 207 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 CALCBP10092 127 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 PRKAR1AP10644 381 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 LAP3P28838 519 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 THBS2P35442 1172 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 PITPNBP48739 271 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 INPP1P49441 399 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 CYB561P49447 251 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 P2RY4P51582 365 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 BIDP55957 195 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 CLRN1P58418 232 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 NANOS3P60323 173 aaKnown RBP9.3□□□□□ -0.92
VPS25-203ENST00000589520 EIF2B1Q14232 305 aaKnown RBP9.3□□□□□ -0.92
VPS25-203ENST00000589520 INSL4Q14641 139 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 BAK1Q16611 211 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 CEP78Q5JTW2 689 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 ACER2Q5QJU3 275 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 ZNF704Q6ZNC4 412 aaPredicted RBP9.3□□□□□ -0.92
VPS25-203ENST00000589520 ASB18Q6ZVZ8 466 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 GDPD3Q7L5L3 318 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 Q8N402 240 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 SLC26A10Q8NG04 563 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 OR52N5Q8NH56 324 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 TRMT10AQ8TBZ6 339 aaKnown RBP9.3□□□□□ -0.92
VPS25-203ENST00000589520 C4orf45Q96LM5 186 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 OR5B2Q96R09 309 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 OR14A2Q96R54 314 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 SF3B5Q9BWJ5 86 aaKnown RBP9.3□□□□□ -0.92
VPS25-203ENST00000589520 PPIL3Q9H2H8 161 aaKnown RBP9.3□□□□□ -0.92
VPS25-203ENST00000589520 NIPAL2Q9H841 368 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 PROK2Q9HC23 129 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 NOX4Q9NPH5 578 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 MRPL22Q9NWU5 206 aaKnown RBP9.3□□□□□ -0.92
VPS25-203ENST00000589520 P4HTMQ9NXG6 502 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 SLCO1C1Q9NYB5 712 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 B3GAT1Q9P2W7 334 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 EXTL2Q9UBQ6 330 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 ETV7Q9Y603 341 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 R4GN57 208 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 V9GY05 133 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 CEP250Q9BV73 2442 aa9.3□□□□□ -0.92
VPS25-203ENST00000589520 TRBV5-7A0A0A0MS05 114 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 MEGF11A6BM72 1044 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 TRABD2BA6NFA1 517 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 IFITM5A6NNB3 132 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 C4orf47A7E2U8 309 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 AIPO00170 330 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 CTDSPLO15194 276 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 MAGEB4O15481 346 aaPredicted RBP9.29□□□□□ -0.92
VPS25-203ENST00000589520 SULT1B1O43704 296 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 ZIC3O60481 467 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 UBL3O95164 117 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 WISP1O95388 367 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 ISG15P05161 165 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 CD2P06729 351 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 CELA2AP08217 269 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 CCL3P10147 92 aa9.29□□□□□ -0.92
VPS25-203ENST00000589520 HLA-DOBP13765 273 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms