RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 AGR3Q8TD06 166 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 MAGEE2Q8TD90 523 aaPredicted RBP4.81□□□□□ -1.64
DNMT1-220ENST00000589351 ROPN1LQ96C74 230 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 CMTM3Q96MX0 182 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 WDFY2Q96P53 400 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 GATA5Q9BWX5 397 aaPredicted RBP4.81□□□□□ -1.64
DNMT1-220ENST00000589351 DPY30Q9C005 99 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 OR11A1Q9GZK7 315 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF350Q9GZX5 532 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 WNT5BQ9H1J7 359 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 OR51I1Q9H343 314 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 PLK3Q9H4B4 646 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 ARMC7Q9H6L4 198 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF442Q9H7R0 627 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 MTHFD2LQ9H903 347 aaPredicted RBP4.81□□□□□ -1.64
DNMT1-220ENST00000589351 PLEKHA2Q9HB19 425 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 CACYBPQ9HB71 228 aaKnown RBP4.81□□□□□ -1.64
DNMT1-220ENST00000589351 AURKAIP1Q9NWT8 199 aaPredicted RBP4.81□□□□□ -1.64
DNMT1-220ENST00000589351 EMCNQ9ULC0 261 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 TMED7Q9Y3B3 224 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 ADAM18Q9Y3Q7 739 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 CHTOPQ9Y3Y2 248 aaKnown RBP4.81□□□□□ -1.64
DNMT1-220ENST00000589351 NOX1Q9Y5S8 564 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 NBEAL1Q6ZS30 2694 aa4.81□□□□□ -1.64
DNMT1-220ENST00000589351 A0A096LPI6 279 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 IGHV1-18A0A0C4DH31 117 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 PRSS51A0A1B0GVH4 220 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 CFAP73A6NFT4 308 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 SAC3D1A6NKF1 404 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 A8MZ25 164 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 hCG_2039718K7EN88 272 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 RNASET2O00584 256 aaKnown RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 TSPAN4O14817 238 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 CPSF4O95639 269 aaKnown RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 PTBP3O95758 552 aaKnown RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 OR12D1P0DN82 309 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 CBR1P16152 277 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF43P17038 809 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 GTF2E2P29084 291 aaKnown RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 TACR3P29371 465 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 CHI3L1P36222 383 aaPredicted RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 ARR3P36575 388 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 RPS19P39019 145 aaKnown RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 GBX2P52951 348 aaPredicted RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 CDH15P55291 814 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 CLDN8P56748 225 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 SELENOVP59797 346 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 TXNL4AP83876 142 aaKnown RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 RELQ04864 619 aaPredicted RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 RIPK1Q13546 671 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 RAB32Q13637 225 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 CEACAM7Q14002 265 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 PTGR1Q14914 329 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 OR7A5Q15622 319 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 ZSWIM7Q19AV6 140 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 TBRG1Q3YBR2 411 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 SLC9B1Q4ZJI4 515 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 HIKESHIQ53FT3 197 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 ZMAT1Q5H9K5 638 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 AP1ARQ63HQ0 302 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 OR4F3Q6IEY1 312 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 TYW3Q6IPR3 259 aaKnown RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 EMBQ6PCB8 327 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 DEF8Q6ZN54 512 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 GPR137CQ8N3F9 429 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 KRTCAP2Q8N6L1 136 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 TMEM99Q8N816 258 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 FAM71CQ8NEG0 241 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 OR9K2Q8NGE7 335 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 OR4A15Q8NGL6 344 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 OR1K1Q8NGR3 316 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 MIPOL1Q8TD10 442 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 UBLCP1Q8WVY7 318 aaPredicted RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF524Q96C55 264 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 DNAJA3Q96EY1 480 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 ZIM3Q96PE6 472 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 TRNT1Q96Q11 434 aaKnown RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 SNX18Q96RF0 628 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 C1orf50Q9BV19 199 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 RBM4Q9BWF3 364 aaKnown RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 LINC00470Q9BZP3 86 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 SLC5A7Q9GZV3 580 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 TUBB1Q9H4B7 451 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 METTL17Q9H7H0 456 aaPredicted RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 MARCOQ9UEW3 520 aaPredicted RBP4.8□□□□□ -1.64
DNMT1-220ENST00000589351 KCNE5Q9UJ90 142 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 OSGIN1Q9UJX0 560 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 RASD1Q9Y272 281 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 CMAHPQ9Y471 501 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 PTGDR2Q9Y5Y4 395 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 MALRD1Q5VYJ5 2156 aa4.8□□□□□ -1.64
DNMT1-220ENST00000589351 CUBNO60494 3623 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 TMEM72A0PK05 275 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 TMEM89A2RUT3 159 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 SMIM30A4D0T7 59 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 TMEM247A6NEH6 219 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 AQP7P3A6NL99 342 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 A8MVM7 634 aa4.79□□□□□ -1.64
DNMT1-220ENST00000589351 FAM157AC9JC47 383 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms