RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 LY6G6FQ5SQ64 297 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 C1QL3Q5VWW1 255 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 ASPHD2Q6ICH7 369 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 LRFN4Q6PJG9 635 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 GALNT16Q8N428 558 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 C12orf45Q8N5I9 185 aaPredicted RBP15.78■□□□□ 0.12
SCARF1-205ENST00000571272 ESX1Q8N693 406 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 LOC100289279A0A1B0GTE1 492 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 TMEM82A0PJX8 343 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 RFPL4AA6NLU0 287 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 RFPL4AL1F8VTS6 287 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 AQP8O94778 261 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 RAB3DO95716 219 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 PLATP00750 562 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 TACR3P29371 465 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 C1orf61Q13536 156 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 EEF1A1P5Q5VTE0 462 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 MCATQ8IVS2 390 aaKnown RBP15.78■□□□□ 0.12
SCARF1-205ENST00000571272 PTDSS2Q9BVG9 487 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 GLS2Q9UI32 602 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 MRPS33Q9Y291 106 aaKnown RBP15.78■□□□□ 0.12
SCARF1-205ENST00000571272 SLC6A5Q9Y345 797 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 AMY2AP04746 511 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 EIF2B5Q13144 721 aaKnown RBP15.77■□□□□ 0.12
SCARF1-205ENST00000571272 SKP2Q13309 424 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 ELP2Q6IA86 826 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 BEST3Q8N1M1 668 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 ZNF321PQ8N8H1 164 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 BOLLQ8N9W6 283 aaKnown RBP15.77■□□□□ 0.12
SCARF1-205ENST00000571272 PXT1Q8NFP0 134 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 OR1J4Q8NGS1 313 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 OR10K1Q8NGX5 313 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 GPX8Q8TED1 209 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 ST8SIA2Q92186 375 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 SLC38A3Q99624 504 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 TMEM185BQ9H7F4 350 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 CGGBP1Q9UFW8 167 aaPredicted RBP15.77■□□□□ 0.12
SCARF1-205ENST00000571272 FARSAQ9Y285 508 aaKnown RBP15.77■□□□□ 0.12
SCARF1-205ENST00000571272 TMEM14AQ9Y6G1 99 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 SLC17A2O00624 439 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 CLDN4O14493 209 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 ALOX12BO75342 701 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 TPPPO94811 219 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 ITGB2P05107 769 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 TNFRSF4P43489 277 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 SCAND1P57086 179 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 DEFA5Q01523 94 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 ATXN7L3Q14CW9 347 aaPredicted RBP15.77■□□□□ 0.12
SCARF1-205ENST00000571272 MPPED2Q15777 294 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 FAM109BQ6ICB4 259 aaPredicted RBP15.77■□□□□ 0.12
SCARF1-205ENST00000571272 OR10K2Q6IF99 312 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 TMEM184AQ6ZMB5 413 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 PRR22Q8IZ63 422 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 STEAP2Q8NFT2 490 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 OTOSQ8NHW6 89 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 SEH1LQ96EE3 360 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 GABRG3Q99928 467 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 WDR13Q9H1Z4 485 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 HRH3Q9Y5N1 445 aa15.77■□□□□ 0.12
SCARF1-205ENST00000571272 TXNDC12O95881 172 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 UBE2IP63279 158 aaKnown RBP15.77■□□□□ 0.11
SCARF1-205ENST00000571272 NR0B2Q15466 257 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 ETFDHQ16134 617 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 SCGB2B2Q4G0G5 96 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 ARMC6Q6NXE6 501 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 MDGA2Q7Z553 956 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 ZNF440Q8IYI8 595 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 ARHGEF39Q8N4T4 335 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 ZNF615Q8N8J6 731 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 OR13H1Q8NG92 308 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 OR1J2Q8NGS2 313 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 SEC22AQ96IW7 307 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 UBQLN4Q9NRR5 601 aa15.77■□□□□ 0.11
SCARF1-205ENST00000571272 MRTO4Q9UKD2 239 aaKnown RBP15.77■□□□□ 0.11
SCARF1-205ENST00000571272 SCDO00767 359 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 CCSO14618 274 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 TNFRSF10CO14798 259 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 SQSTM1Q13501 440 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.76■□□□□ 0.11
SCARF1-205ENST00000571272 GLYATL3Q5SZD4 288 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 TAF8Q7Z7C8 310 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 LIPHQ8WWY8 451 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 SLC25A36Q96CQ1 311 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 LOC100509620A0A075B734 347 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 DCDC2BA2VCK2 349 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 ZNF264O43296 627 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 PMS2P2O95744 297 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 SPARCP09486 303 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 ZNF28P17035 718 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 PBX2P40425 430 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 FUT7Q11130 342 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 SLC17A1Q14916 467 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 NDUFAF7Q7L592 441 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 ZSCAN1Q8NBB4 408 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 SLC25A28Q96A46 364 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 MMABQ96EY8 250 aaPredicted RBP15.76■□□□□ 0.11
SCARF1-205ENST00000571272 MRGPRX1Q96LB2 322 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 RTN4RQ9BZR6 473 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 FREM3P0C091 2139 aa15.76■□□□□ 0.11
SCARF1-205ENST00000571272 H3BUI4 141 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms