RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 NUBP1P53384 320 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 BIDP55957 195 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 RAP1BP61224 184 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 RAP1AP62834 184 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 TCF15Q12870 199 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 ZMAT1Q5H9K5 638 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 LIPNQ5VXI9 398 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 RAET1LQ5VY80 246 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 GLRX5Q86SX6 157 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 SPERTQ8NA61 448 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 RPS4Y2Q8TD47 263 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 SLC25A43Q8WUT9 341 aaPredicted RBP8.42□□□□□ -1.06
LINC00838-201ENST00000562956 SLC39A7Q92504 469 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 AP3S1Q92572 193 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 MED30Q96HR3 178 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 RANGRFQ9HD47 186 aaPredicted RBP8.42□□□□□ -1.06
LINC00838-201ENST00000562956 COMMD3Q9UBI1 195 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 IL17BQ9UHF5 180 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 DKKL1Q9UK85 242 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 IKZF2Q9UKS7 526 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 ALPK2Q86TB3 2170 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 PRR33A8MZF0 331 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 LOC110117498-PIK3R3F6TDL0 507 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 ZFPL1O95159 310 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 SNX4O95219 450 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 OR10A3P58181 314 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 STPG1Q5TH74 334 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 FAM220AQ7Z4H9 259 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 KCTD20Q7Z5Y7 419 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 GPAT4Q86UL3 456 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 TMEM41AQ96HV5 264 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 OR14A2Q96R54 314 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 MNTQ99583 582 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 SMAD5Q99717 465 aaKnown RBP8.41□□□□□ -1.06
LINC00838-201ENST00000562956 MMP28Q9H239 520 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 SLCO1C1Q9NYB5 712 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 FRRS1LQ9P0K9 344 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 HDGFL3Q9Y3E1 203 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF318Q5VUA4 2279 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 A0A0X1KG70 313 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 A0A1B0GTH9 108 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 SPAARA0A1B0GVQ0 90 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 OR2M5A3KFT3 312 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 STMND1H3BQB6 276 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 CBR3O75828 277 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 P04436 131 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 CD1AP06126 327 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 SPARCP09486 303 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 TACSTD2P09758 323 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 CRABP1P29762 137 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 GPR85P60893 370 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 ADAM8P78325 824 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 GLO1Q04760 184 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 EGR3Q06889 387 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF79Q15937 498 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF181Q2M3W8 571 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 DDI2Q5TDH0 399 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 ADPRHL1Q8NDY3 354 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 ADAMTS17Q8TE56 1095 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 UBASH3BQ8TF42 649 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 RGP1Q92546 391 aaPredicted RBP8.41□□□□□ -1.06
LINC00838-201ENST00000562956 MIB2Q96AX9 1013 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 CCDC120Q96HB5 630 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 STMN3Q9NZ72 180 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 TMEM14AQ9Y6G1 99 aa8.41□□□□□ -1.06
LINC00838-201ENST00000562956 A0A0G2JMP0 313 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 SULT2B1O00204 365 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 PTTG1O95997 202 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 SERPINA3P01011 423 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 MYL9P24844 172 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 MAGEB1P43366 347 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF544Q6NX49 715 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 TMPPEQ6ZT21 453 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 SYT9Q86SS6 491 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 UEVLDQ8IX04 471 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 TEX19Q8NA77 164 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 DEPPQ9NTK1 212 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 FAM86C1Q9NVL1 165 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 NUFIP1Q9UHK0 495 aaKnown RBP8.4□□□□□ -1.06
LINC00838-201ENST00000562956 FBXO9Q9UK97 447 aaPredicted RBP8.4□□□□□ -1.06
LINC00838-201ENST00000562956 CELSR3Q9NYQ7 3312 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 OTOGLQ3ZCN5 2332 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 A0A0G2JK05 382 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 ISPDA4D126 451 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 CDK2AP1O14519 115 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 TRAF3IP2O43734 574 aaPredicted RBP8.4□□□□□ -1.06
LINC00838-201ENST00000562956 HPGDSO60760 199 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 TSC22D2O75157 780 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 WNT11O96014 354 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 RFPL3SP0C7P2 107 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 FTH1P19P0C7X4 201 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 FKBP2P26885 142 aaKnown RBP8.4□□□□□ -1.06
LINC00838-201ENST00000562956 PTGS2P35354 604 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 CYB561P49447 251 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 BLVRAP53004 296 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 OC90Q02509 493 aaPredicted RBP8.4□□□□□ -1.06
LINC00838-201ENST00000562956 TOMM20Q15388 145 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 IDNKQ5T6J7 187 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 PXDC1Q5TGL8 231 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 FAM205BPQ63HN1 556 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 720.1 ms