RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 HIKESHIQ53FT3 197 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 KLHL24Q6TFL4 600 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 FOXL2NBQ6ZUU3 175 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 GLB1L2Q8IW92 636 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 DEPDC4Q8N2C3 294 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 C17orf78Q8N4C9 275 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 PROKR2Q8NFJ6 384 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 OR8J1Q8NGP2 316 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 TRUB1Q8WWH5 349 aaKnown RBP13.78□□□□□ -0.2
SPG7-204ENST00000561911 PTP4A1Q93096 173 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 S100PBPQ96BU1 408 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 BOD1Q96IK1 185 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 IL4I1Q96RQ9 567 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 ACTR6Q9GZN1 396 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 OR10A4Q9H209 315 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 RASSF4Q9H2L5 321 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 NELFAQ9H3P2 528 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 SEC61A2Q9H9S3 476 aa13.78□□□□□ -0.2
SPG7-204ENST00000561911 COA3Q9Y2R0 106 aaPredicted RBP13.78□□□□□ -0.2
SPG7-204ENST00000561911 A0A096LPE4 126 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 A0A1W2PPZ6 126 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 OR5H1A6NKK0 313 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 FAM171A2A8MVW0 826 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 H0YAE9 185 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 GYPBP06028 91 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 CLUP10909 449 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 LAP3P28838 519 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 CDAP32320 146 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 CAPGP40121 348 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 GUCA1AP43080 201 aaPredicted RBP13.77□□□□□ -0.21
SPG7-204ENST00000561911 CENPAP49450 140 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 SGCAQ16586 387 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 NRN1LQ496H8 165 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 BBS1Q8NFJ9 593 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 OR51L1Q8NGJ5 315 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 HTRA1Q92743 480 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 NABP1Q96AH0 204 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 FOXN4Q96NZ1 517 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 USB1Q9BQ65 265 aaKnown RBP13.77□□□□□ -0.21
SPG7-204ENST00000561911 OR51V1Q9H2C8 321 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 SIAEQ9HAT2 523 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 ZNF226Q9NYT6 803 aa13.77□□□□□ -0.21
SPG7-204ENST00000561911 ANKHD1Q8IWZ3 2542 aaKnown RBP13.77□□□□□ -0.21
SPG7-204ENST00000561911 USP9YO00507 2555 aaPredicted RBP13.76□□□□□ -0.21
SPG7-204ENST00000561911 C19orf84I3L1E1 186 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 PRODHO43272 600 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 FARS2O95363 451 aaKnown RBP13.76□□□□□ -0.21
SPG7-204ENST00000561911 GPANK1O95872 356 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 OR8G3PP0DMU2 310 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 GAAP10253 952 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 PPP3CBP16298 524 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 NPR2P20594 1047 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 MSR1P21757 451 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 HOXC12P31275 282 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 SNRPGP62308 76 aaKnown RBP13.76□□□□□ -0.21
SPG7-204ENST00000561911 GLO1Q04760 184 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 IL18R1Q13478 541 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 AADACL4Q5VUY2 407 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 P2RY8Q86VZ1 359 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 SLC22A24Q8N4F4 322 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 ZNRF4Q8WWF5 429 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 TFAP2CQ92754 450 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 UBE2FQ969M7 185 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 APOL4Q9BPW4 351 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 POLE4Q9NR33 117 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 SLC17A5Q9NRA2 495 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 MOKQ9UQ07 419 aa13.76□□□□□ -0.21
SPG7-204ENST00000561911 ARPC4-TTLL3A0A0A6YYG9 625 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 PRSS44E7EML9 344 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 GLCEO94923 617 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 CLDN1O95832 211 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 CLIC3O95833 236 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 SCG5P05408 212 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 HOXB1P14653 301 aaPredicted RBP13.75□□□□□ -0.21
SPG7-204ENST00000561911 SLC2A5P22732 501 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 PEX19P40855 299 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 HSPA13P48723 471 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 UBE2NP61088 152 aaKnown RBP13.75□□□□□ -0.21
SPG7-204ENST00000561911 APOFQ13790 326 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 KLHL12Q53G59 568 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 TIMM23BQ5SRD1 257 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 C6orf52Q5T4I8 152 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 LINC01590Q5TEZ4 76 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 FAM27BQ5VT28 67 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 ZNF691Q5VV52 312 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 NXNL2Q5VZ03 156 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 BCDIN3DQ7Z5W3 292 aaKnown RBP13.75□□□□□ -0.21
SPG7-204ENST00000561911 SKA3Q8IX90 412 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 CCDC36Q8IYA8 594 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 ENTHD1Q8IYW4 607 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 WDR31Q8NA23 367 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 SLC26A10Q8NG04 563 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 OR6K6Q8NGW6 343 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 C11orf40Q8WZ69 217 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 SH3GL3Q99963 347 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 EMC7Q9NPA0 242 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 OBP2BQ9NPH6 170 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 RASSF1Q9NS23 344 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 AMDHD2Q9Y303 409 aa13.75□□□□□ -0.21
SPG7-204ENST00000561911 CACNA1CQ13936 2221 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms