RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CHST11Q9NPF2 352 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 PNPLA3Q9NST1 481 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 C20orf141Q9NUB4 165 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 VNN3Q9NY84 501 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 EMC3Q9P0I2 261 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 PDP1Q9P0J1 537 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 CLCF1Q9UBD9 225 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 RASD1Q9Y272 281 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 U3KQV3 271 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 EML6Q6ZMW3 1958 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 A0A1B0GUH1 482 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 CGB1A6NKQ9 187 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF724A8MTY0 619 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 H0YC42 278 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 CDC42EP2O14613 210 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 IDH3BO43837 385 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 PIP5K1CO60331 668 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 SS18L1O75177 396 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 PTP4A3O75365 173 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 RCBTB2O95199 551 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 OR6A2O95222 327 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 BAG2O95816 211 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 OPN1LWP04000 364 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ALPLP05186 524 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 TPOP07202 933 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF23P17027 643 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 CDH2P19022 906 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 FUT1P19526 365 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 PPIFP30405 207 aaKnown RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 TIMP3P35625 211 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 CA7P43166 264 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 DAP3P51398 398 aaKnown RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 P2RY4P51582 365 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ALDH3A2P51648 485 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 IST1P53990 364 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 TPD52P55327 224 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ESRRGP62508 458 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 PPP2R2BQ00005 443 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 LTBQ06643 244 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 PUDPQ08623 228 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 PMS2P3Q13401 168 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 FHL1Q13642 323 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 SLC17A1Q14916 467 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 PON3Q15166 354 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 GUSBP1Q15486 140 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 TRIP10Q15642 601 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 RFX4Q33E94 735 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ZBED5Q49AG3 693 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 OTUD3Q5T2D3 398 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 RIPPLY2Q5TAB7 128 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 FAM205BPQ63HN1 556 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 KDM4DQ6B0I6 523 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 TMEM225Q6GV28 225 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ABLIM2Q6H8Q1 611 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 TMEM211Q6ICI0 200 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 RGS7BPQ6MZT1 257 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 HMBOX1Q6NT76 420 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 SMARCD3Q6STE5 483 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 B3GNT6Q6ZMB0 384 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 RASSF6Q6ZTQ3 369 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 FCRLAQ7L513 359 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 TMEM179BQ7Z7N9 219 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ATG16L2Q8NAA4 619 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ZBTB34Q8NCN2 500 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 OR5M9Q8NGP3 310 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 OR5J2Q8NH18 312 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 FNDC9Q8TBE3 224 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 EME1Q96AY2 570 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 SLC25A36Q96CQ1 311 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 GMPPAQ96IJ6 420 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 RDH12Q96NR8 316 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 OXGR1Q96P68 337 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 GPX7Q96SL4 187 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 CIB1Q99828 191 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 TTYH2Q9BSA4 534 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 SRXN1Q9BYN0 137 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 VCXQ9H320 206 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 VCX3BQ9H321 246 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ZMAT3Q9HA38 289 aaKnown RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 PAPOLBQ9NRJ5 636 aaKnown RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 IL20Q9NYY1 176 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 USE1Q9NZ43 259 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 KIF17Q9P2E2 1029 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 KLHL9Q9P2J3 617 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 KLHL13Q9P2N7 655 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 NDRG4Q9ULP0 352 aaKnown RBP5.08□□□□□ -1.6
SCAF11-213ENST00000550629 RCE1Q9Y256 329 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 SIGLEC7Q9Y286 467 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 POFUT2Q9Y2G5 429 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 FAM215AQ9Y5M1 114 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ORC6Q9Y5N6 252 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 CDH10Q9Y6N8 788 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF462Q96JM2 2506 aa5.08□□□□□ -1.6
SCAF11-213ENST00000550629 A0A1W2PRG6 482 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 A6NIZ1 184 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 OR6C65A6NJZ3 312 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF716A6NP11 495 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 HSPB2A8KAH6 182 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 CENPBD1B2RD01 187 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 MS4A18H0YCH9 400 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms