RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ZNF446Q9NWS9 450 aa10.14□□□□□ -0.79
GABPB1-206ENST00000543881 A4GNTQ9UNA3 340 aa10.14□□□□□ -0.79
GABPB1-206ENST00000543881 GRIP1Q9Y3R0 1128 aa10.14□□□□□ -0.79
GABPB1-206ENST00000543881 UGT2A1Q9Y4X1 527 aa10.14□□□□□ -0.79
GABPB1-206ENST00000543881 TGP01266 2768 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 MCIDASD6RGH6 385 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 FARS2O95363 451 aaKnown RBP10.13□□□□□ -0.79
GABPB1-206ENST00000543881 MSMBP08118 114 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 MAGEB1P43366 347 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 FMODQ06828 376 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 SLC36A2Q495M3 483 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 NRN1LQ496H8 165 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 AWAT1Q58HT5 328 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 C10orf128Q5T292 105 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 TMEM53Q6P2H8 277 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 LRRC18Q8N456 261 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 CPEB3Q8NE35 698 aaKnown RBP10.13□□□□□ -0.79
GABPB1-206ENST00000543881 CLDND2Q8NHS1 167 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 NABP1Q96AH0 204 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 TPD52L3Q96J77 140 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 CMTM6Q9NX76 183 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 ARMCX1Q9P291 453 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 MED31Q9Y3C7 131 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 SNX13Q9Y5W8 968 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 PKD1L1Q8TDX9 2849 aa10.13□□□□□ -0.79
GABPB1-206ENST00000543881 IGLV3-9A0A075B6K5 115 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 A0A1W2PPW3 197 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 CENPBD1B2RD01 187 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 TMPRSS2O15393 492 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 ENTPD5O75356 428 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 SNAP29O95721 258 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 IFNA14P01570 189 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 VIMP08670 466 aaKnown RBP10.12□□□□□ -0.79
GABPB1-206ENST00000543881 THRBP10828 461 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 ZNF250P15622 560 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 EPHA1P21709 976 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 LSP1P33241 339 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 LIMS1P48059 325 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 DAP3P51398 398 aaKnown RBP10.12□□□□□ -0.79
GABPB1-206ENST00000543881 ZNF84P51523 738 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 SELENOWP63302 87 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 FHL1Q13642 323 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 MAPRE2Q15555 327 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 RGS7BPQ6MZT1 257 aaPredicted RBP10.12□□□□□ -0.79
GABPB1-206ENST00000543881 DPPA2Q7Z7J5 298 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 MICU2Q8IYU8 434 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 POU5F2Q8N7G0 328 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 CLDN22Q8N7P3 220 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 PCYOX1LQ8NBM8 494 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 RBM15BQ8NDT2 890 aaKnown RBP10.12□□□□□ -0.79
GABPB1-206ENST00000543881 OR2T12Q8NG77 320 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 GTF3AQ92664 365 aaKnown RBP10.12□□□□□ -0.79
GABPB1-206ENST00000543881 RDH5Q92781 318 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 RCN3Q96D15 328 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 LRRC37BQ96QE4 947 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 JMJD8Q96S16 334 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 RACGAP1Q9H0H5 632 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 NARFLQ9H6Q4 476 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 ZNF696Q9H7X3 374 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 CDH20Q9HBT6 801 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 ZNF275Q9NSD4 429 aaPredicted RBP10.12□□□□□ -0.79
GABPB1-206ENST00000543881 MAN2C1Q9NTJ4 1040 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 MRGBPQ9NV56 204 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 GID8Q9NWU2 228 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 TAAR3PQ9P1P4 343 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 HIF3AQ9Y2N7 669 aa10.12□□□□□ -0.79
GABPB1-206ENST00000543881 SLC22A23A1A5C7 686 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 ELOVL7A1L3X0 281 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 NPIPB13A6NJU9 1138 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 NPIPB4C9JG80 1138 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 J3KTA2 159 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 FFAR1O14842 300 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 MGRN1O60291 552 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 RP2O75695 350 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 LCKP06239 509 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 MAKP20794 623 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 ACHEP22303 614 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 YAP1P46937 504 aaKnown RBP10.11□□□□□ -0.79
GABPB1-206ENST00000543881 UCP2P55851 309 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 MRPS34P82930 218 aaKnown RBP10.11□□□□□ -0.79
GABPB1-206ENST00000543881 DEFA6Q01524 100 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 GUCY1A3Q02108 690 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 TBC1D28Q2M2D7 210 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 PABPC1L2AQ5JQF8 200 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 TMEM255AQ5JRV8 349 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 FAHD2BQ6P2I3 314 aaPredicted RBP10.11□□□□□ -0.79
GABPB1-206ENST00000543881 SLC25A47Q6Q0C1 308 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 VTCN1Q7Z7D3 282 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 IGFN1Q86VF2 1251 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 SLC15A3Q8IY34 581 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 LRRC75AQ8NAA5 344 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 ZNF519Q8TB69 540 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 SYNPRQ8TBG9 265 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 NSMAFQ92636 917 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 BPIFA2Q96DR5 249 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 FAHD2AQ96GK7 314 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 PRRC1Q96M27 445 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 TXNIPQ9H3M7 391 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 C1orf198Q9H425 327 aa10.11□□□□□ -0.79
GABPB1-206ENST00000543881 SIAEQ9HAT2 523 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms