RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 MT-ND4P03905 459 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 TCRBP04435 133 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 EPHA8P29322 1005 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 MDH2P40926 338 aaKnown RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 TBC1D28Q2M2D7 210 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 FAM122BQ7Z309 247 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 ARHGEF39Q8N4T4 335 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 MVB12AQ96EY5 273 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SLC25A44Q96H78 314 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SENP5Q96HI0 755 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 C7orf34Q96L11 122 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SGPP1Q9BX95 441 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 MMP28Q9H239 520 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 MAGEB4O15481 346 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 CNOT4O95628 575 aaKnown RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 LGI1O95970 557 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 IGLV3-27P01718 113 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 FUCA1P04066 466 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 ZDHHC11BP0C7U3 371 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SLC19A1P41440 591 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 GSK3AP49840 483 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 P2RX1P51575 399 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 PIGFQ07326 219 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 MYO9BQ13459 2157 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 THEM4Q5T1C6 240 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 TMEM71Q6P5X7 295 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SLC38A6Q8IZM9 456 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 OR5AR1Q8NGP9 310 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 THAP3Q8WTV1 239 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SGK3Q96BR1 496 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 KATNB1Q9BVA0 655 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 RTL8AQ9BWD3 113 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 HLA-DOBP13765 273 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 ENPP1P22413 925 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 HOXD9P28356 352 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 CLDN6P56747 220 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 RPS25P62851 125 aaKnown RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 KCNJ10P78508 379 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 CTBSQ01459 385 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 OR7A5Q15622 319 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 WIPI1Q5MNZ9 446 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 HIST2H3PS2Q5TEC6 136 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 MOB3CQ70IA8 216 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 CISD2Q8N5K1 135 aaKnown RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 PNPLA1Q8N8W4 532 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 PSMF1Q92530 271 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SLC29A1Q99808 456 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 EHFQ9NZC4 300 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 PRSS21Q9Y6M0 314 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 TUBGCP6Q96RT7 1819 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 ZAR1LA6NP61 321 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 M0R3H8 397 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 ST8SIA5O15466 376 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SMIM18P0DKX4 95 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SLURP2P0DP57 97 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 ZNF26P17031 533 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SSTR2P30874 369 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 MAGEB1P43366 347 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 HOXA1P49639 335 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 FAM189BP81408 668 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 ZNF85Q03923 595 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 IL11RAQ14626 422 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 TOMM34Q15785 309 aaPredicted RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 UNQ9370/PRO34162Q6UXP9 181 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 GALNT10Q86SR1 603 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 OR4A16Q8NH70 328 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 NTNG2Q96CW9 530 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 OR5B2Q96R09 309 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 SCNM1Q9BWG6 230 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 TMEM59Q9BXS4 323 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 PTGDR2Q9Y5Y4 395 aa7.18□□□□□ -1.26
VPS13D-211ENST00000543710 CFAP20Q9Y6A4 193 aaKnown RBP7.18□□□□□ -1.26
VPS13D-211ENST00000543710 H0Y8X5 98 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 ABLIM3O94929 683 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 LCATP04180 440 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 ZP3P21754 424 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 GALNSP34059 522 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 PTGER4P35408 488 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 CLDN2P57739 230 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 UBE2KP61086 200 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 OXA1LQ15070 435 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 RPS27LQ71UM5 84 aaKnown RBP7.17□□□□□ -1.26
VPS13D-211ENST00000543710 WFDC8Q8IUA0 241 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 BOLLQ8N9W6 283 aaKnown RBP7.17□□□□□ -1.26
VPS13D-211ENST00000543710 BOCQ9BWV1 1114 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 VN1R3Q9BXE9 311 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 RAB1BQ9H0U4 201 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 UTS2O95399 124 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 MPIG6BO95866 241 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 HMGN2P05204 90 aaKnown RBP7.17□□□□□ -1.26
VPS13D-211ENST00000543710 OR8U8P0C7N1 319 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 PRSS56P0CW18 603 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 SRMP19623 302 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 GIFP27352 417 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 RPL27P61353 136 aaKnown RBP7.17□□□□□ -1.26
VPS13D-211ENST00000543710 GPR157Q5UAW9 335 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 STEAP1BQ6NZ63 245 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 MMP21Q8N119 569 aa7.17□□□□□ -1.26
VPS13D-211ENST00000543710 ZC3HAV1LQ96H79 300 aaKnown RBP7.17□□□□□ -1.26
VPS13D-211ENST00000543710 BARHL1Q9BZE3 327 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms