RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 DLL4Q9NR61 685 aa17.75■□□□□ 0.43
SUDS3-204ENST00000543473 TRAV1-2A0A0B4J238 106 aa17.75■□□□□ 0.43
SUDS3-204ENST00000543473 ITGB8P26012 769 aa17.75■□□□□ 0.43
SUDS3-204ENST00000543473 ZNF628Q5EBL2 1059 aa17.75■□□□□ 0.43
SUDS3-204ENST00000543473 BAP18Q8IXM2 172 aa17.75■□□□□ 0.43
SUDS3-204ENST00000543473 PARP12Q9H0J9 701 aaKnown RBP17.75■□□□□ 0.43
SUDS3-204ENST00000543473 MSTNO14793 375 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 ZNF44P15621 663 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 POU3F3P20264 500 aaPredicted RBP17.74■□□□□ 0.43
SUDS3-204ENST00000543473 METRNLQ641Q3 311 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 RNF165Q6ZSG1 346 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 FAM57BQ71RH2 274 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 BHLHA9Q7RTU4 235 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 ASB16Q96NS5 453 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 TGIF2Q9GZN2 237 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 OR10A5Q9H207 317 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 OR10A2Q9H208 303 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 KIR2DS5A0A0G2JLQ3 304 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 A0A0G2JNG1 304 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 KIR2DS3K7RE56 304 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 GPR137BO60478 399 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 DUSP3P51452 185 aaPredicted RBP17.74■□□□□ 0.43
SUDS3-204ENST00000543473 RAG2P55895 527 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 RPS18P62269 152 aaKnown RBP17.74■□□□□ 0.43
SUDS3-204ENST00000543473 MRPS21P82921 87 aaKnown RBP17.74■□□□□ 0.43
SUDS3-204ENST00000543473 KIR2DS5Q14953 304 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 SMUG1Q53HV7 270 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 GLDNQ6ZMI3 551 aaPredicted RBP17.74■□□□□ 0.43
SUDS3-204ENST00000543473 LINC00346Q8IVM7 164 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 ZNF595Q8IYB9 648 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 OR5M1Q8NGP8 315 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 ARSGQ96EG1 525 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 ZNF578Q96N58 590 aaPredicted RBP17.74■□□□□ 0.43
SUDS3-204ENST00000543473 STACQ99469 402 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 TIMM8BQ9Y5J9 83 aaPredicted RBP17.74■□□□□ 0.43
SUDS3-204ENST00000543473 LEUTXA8MZ59 168 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 FASLGP48023 281 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 P2RX1P51575 399 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 DUSP8Q13202 625 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 NANPQ8TBE9 248 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 C19orf43Q9BQ61 176 aa17.74■□□□□ 0.43
SUDS3-204ENST00000543473 TMEM235A6NFC5 223 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 OPN1LWP04000 364 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 JMJD7P0C870 316 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 SLC35E2P0CK97 266 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 OR4C16Q8NGL9 310 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 DCBLD2Q96PD2 775 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 CHRDQ9H2X0 955 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 CEP290O15078 2479 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 YBX1P67809 324 aaKnown RBP17.73■□□□□ 0.43
SUDS3-204ENST00000543473 B4GALNT1Q00973 533 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 STAC2Q6ZMT1 411 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 NUDT22Q9BRQ3 303 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 OR52A1Q9UKL2 312 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 C19orf53Q9UNZ5 99 aaPredicted RBP17.73■□□□□ 0.43
SUDS3-204ENST00000543473 SHOXO15266 292 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 IGHG1P01857 330 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 HBE1P02100 147 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 SERPINF1P36955 418 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 TAGLN2P37802 199 aaKnown RBP17.73■□□□□ 0.43
SUDS3-204ENST00000543473 CDK5Q00535 292 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 CLINT1Q14677 625 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 ZNF77Q15935 545 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 PLXDC1Q8IUK5 500 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 TEX19Q8NA77 164 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 MED16Q9Y2X0 877 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 PCYT1BQ9Y5K3 369 aaPredicted RBP17.73■□□□□ 0.43
SUDS3-204ENST00000543473 A0A087WZY1 265 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 PRAMEF27A3QJZ7 478 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 OR6C6A6NF89 314 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 PYCARD-AS1I3L0S3 204 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 SULT2B1O00204 365 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 SUSD5O60279 629 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 ATG12O94817 140 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 OR13C7P0DN81 318 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 ATF1P18846 271 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 PRAMEF9Q5VWM5 478 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 IL17RCQ8NAC3 791 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 MR1Q95460 341 aa17.73■□□□□ 0.43
SUDS3-204ENST00000543473 TRAV36DV7A0A075B6V5 113 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 IL5P05113 134 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 CD22P20273 847 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 FAM209AQ5JX71 171 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 ANGPTL5Q86XS5 388 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 RSPRY1Q96DX4 576 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 PBX4Q9BYU1 374 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 IL20Q9NYY1 176 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 URGCP-MRPS24S4R325 110 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 BRINP1O60477 761 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 WNT1P04628 370 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 EFNA3P52797 238 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 MAT1AQ00266 395 aaKnown RBP17.72■□□□□ 0.43
SUDS3-204ENST00000543473 PARM1Q6UWI2 310 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 MED25Q71SY5 747 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 CHRM2P08172 466 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 ZNF250P15622 560 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 CXCL12P48061 93 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 CSNK1A1P48729 337 aa17.72■□□□□ 0.43
SUDS3-204ENST00000543473 CNN3Q15417 329 aaKnown RBP17.72■□□□□ 0.43
SUDS3-204ENST00000543473 TMEM201Q5SNT2 666 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms