RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 NXPH2O95156 264 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 NXPH3O95157 252 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 UTS2O95399 124 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ELAVL4P26378 380 aaKnown RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 CD38P28907 300 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 SLC7A9P82251 487 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 PHYHIPQ92561 330 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 DVL3Q92997 716 aaPredicted RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ZCCHC4Q9H5U6 513 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 LYRM2Q9NU23 88 aaPredicted RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 GOLT1BQ9Y3E0 138 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 SNX11Q9Y5W9 270 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 NKX6-3A6NJ46 265 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM200CA6NKL6 621 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ATXN1LP0C7T5 689 aaKnown RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 JUNBP17275 347 aaPredicted RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ZP3P21754 424 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 FAM3DQ96BQ1 224 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 DCLRE1CQ96SD1 692 aaKnown RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ULBP3Q9BZM4 244 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 OR6C76A6NM76 312 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 DOK2O60496 412 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 RGS11O94810 467 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 MT-ND4LP03901 98 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 QDPRP09417 244 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 FURINP09958 794 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 GABREP78334 506 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 C17orf67Q0P5P2 114 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 CDONQ4KMG0 1287 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 OR2T2Q6IF00 324 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 KCNRGQ8N5I3 272 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ARRDC2Q8TBH0 407 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF775Q96BV0 537 aaPredicted RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 FGGYQ96C11 551 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 PLK3Q9H4B4 646 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM189-UBE2V1I3L0A0 370 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SCRG1O75711 98 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 CYBAP13498 195 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 ENPP1P22413 925 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 EXOSC2Q13868 293 aaKnown RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 MOGAT2Q3SYC2 334 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 ZMAT1Q5H9K5 638 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 RTL10Q7L3V2 364 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SIGLECL1Q8N7X8 197 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 LFNGQ8NES3 379 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 FAM174AQ8TBP5 190 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 UBTD2Q8WUN7 234 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SLC25A21Q9BQT8 299 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 GMPR2Q9P2T1 348 aaKnown RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 GOLGA4Q13439 2230 aaKnown RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 TRDV1A0A1B0GX56 115 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 OR5K3A6NET4 321 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 M0QZK8 103 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 GGCTO75223 188 aaKnown RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 ABHD16AO95870 558 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 HPNP05981 417 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 OR8B8Q15620 311 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SLC35D3Q5M8T2 416 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 LGI3Q8N145 548 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 EID2Q8N6I1 236 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SLC24A4Q8NFF2 622 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 CLSTN3Q9BQT9 956 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 UTP23Q9BRU9 249 aaKnown RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SRRQ9GZT4 340 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SLC25A32Q9H2D1 315 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 DECR2Q9NUI1 292 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF814B7Z6K7 855 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 AKR7A2O43488 359 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 GJB3O75712 270 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 ATP1B1P05026 303 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 CRMP1Q14194 572 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 IQCJQ1A5X6 159 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 GDPD3Q7L5L3 318 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 CLEC14AQ86T13 490 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SLC39A11Q8N1S5 342 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 CMTM3Q96MX0 182 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SLC46A1Q96NT5 459 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 TAF9BQ9HBM6 251 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 HEYLQ9NQ87 328 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 GPR55Q9Y2T6 319 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 CHD2O14647 1828 aaKnown RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 ZFP92A6NM28 416 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SPINT2O43291 252 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 CA3P07451 260 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 CLEC2LP0C7M8 214 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SRMP19623 302 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 FAM74A1Q5RGS3 127 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 WDR88Q6ZMY6 472 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 OVCH1Q7RTY7 1134 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 LINC00346Q8IVM7 164 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 HSD17B11Q8NBQ5 300 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 OR52N1Q8NH53 320 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM255BQ8WV15 326 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF583Q96ND8 569 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 MTCH1Q9NZJ7 389 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 LRP6O75581 1613 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF732B4DXR9 585 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 SLC10A3P09131 477 aa9.16□□□□□ -0.94
COL4A6-208ENST00000538570 APEHP13798 732 aaKnown RBP9.16□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF26P17031 533 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms