RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ZNF133P52736 654 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TEKQ02763 1124 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 C10orf128Q5T292 105 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 METTL21CQ5VZV1 264 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 FAHD2BQ6P2I3 314 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TMEM255BQ8WV15 326 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 FAHD2AQ96GK7 314 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ECSITQ9BQ95 431 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SIAEQ9HAT2 523 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CCNB1IP1Q9NPC3 277 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 DECR2Q9NUI1 292 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 IGHV1-69-2A0A0G2JMI3 117 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 FBP2O00757 339 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TPD52L2O43399 206 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ATP8B1O43520 1251 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 OR5F1O95221 314 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 VENTXO95231 258 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TNFRSF1BP20333 461 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CCNOP22674 350 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MRPS34P82930 218 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MVKQ03426 396 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 RABL3Q5HYI8 236 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 PABPC1L2AQ5JQF8 200 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 AVPI1Q5T686 147 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ACSM5Q6NUN0 579 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 C12orf54Q6X4T0 127 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TEX29Q8N6K0 151 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CPEB3Q8NE35 698 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 OR1J1Q8NGS3 322 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ZFAND2BQ8WV99 257 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TMEM239Q8WW34 195 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 LIPHQ8WWY8 451 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ZNF665Q9H7R5 613 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SMURF2Q9HAU4 748 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 C20orf141Q9NUB4 165 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 RIMS3Q9UJD0 308 aa16.78■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SLC2A10O95528 541 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 PNPP00491 289 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 IGHV3-13P01766 116 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 NR2C1P13056 603 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 STOMP27105 288 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CDAP32320 146 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 GLO1Q04760 184 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 PIN1Q13526 163 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ARMC4Q5T2S8 1044 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CALHM3Q86XJ0 350 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 OR8J3Q8NGG0 315 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MOSPD2Q8NHP6 518 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ZNF418Q8TF45 676 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 RAB39BQ96DA2 213 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MED31Q9Y3C7 131 aa16.77■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SHOX2O60902 331 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 IFNA14P01570 189 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 TSPAN19P0C672 248 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 THRBP10828 461 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ZNF32P17041 273 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 GCH1P30793 250 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 LAPTM4AQ15012 233 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 SGCAQ16586 387 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 TSTQ16762 297 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 HFEQ30201 348 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ERICH5Q6P6B1 374 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 UNQ6126/PRO20091Q6UXV3 157 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 THSD4Q6ZMP0 1018 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 USP51Q70EK9 711 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 SEMA6DQ8NFY4 1073 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 GTF3AQ92664 365 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 HDAC2Q92769 488 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 LRRC58Q96CX6 371 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 CCDC134Q9H6E4 229 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 SAP30LQ9HAJ7 183 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 EIF3KQ9UBQ5 218 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 UGT2A1Q9Y4X1 527 aa16.76■□□□□ 0.27
TNFRSF1B-204ENST00000536782 GMNCA6NCL1 334 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 NPIPB13A6NJU9 1138 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 CLDN25C9JDP6 229 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 NPIPB4C9JG80 1138 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 MPZL1O95297 269 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 TROVE2P10155 538 aaKnown RBP eCLIP16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 OR1E2P47887 323 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ZNF81P51508 661 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 FMODQ06828 376 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 CD47Q08722 323 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ZNF718Q3SXZ3 478 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 NSMAFQ92636 917 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 NABP1Q96AH0 204 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 NMD3Q96D46 503 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 TIMD4Q96H15 378 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 POM121L2Q96KW2 1035 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 TXNIPQ9H3M7 391 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 G6PC2Q9NQR9 355 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 MRGBPQ9NV56 204 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 WIPI2Q9Y4P8 454 aa16.75■□□□□ 0.27
TNFRSF1B-204ENST00000536782 IGKV1D-43A0A0B4J1Z2 117 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 C5orf49A4QMS7 147 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 FXYD1O00168 92 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 PLPP2O43688 288 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 NPPAP01160 153 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 GDI2P50395 445 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms