RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 SQLEQ14534 574 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 LASP1Q14847 261 aaKnown RBP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 CD226Q15762 336 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 ZNF141Q15928 474 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 SGCBQ16585 318 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 TSTQ16762 297 aaKnown RBP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 PLPPR5Q32ZL2 321 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 KLHL22Q53GT1 634 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 AGKQ53H12 422 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 PAGE3Q5JUK9 113 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 DCST2Q5T1A1 773 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 CBLN3Q6UW01 205 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 PAMR1Q6UXH9 720 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 ZNF621Q6ZSS3 439 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 LINGO2Q7L985 606 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 SZRD1Q7Z422 152 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 MTERF4Q7Z6M4 381 aaKnown RBP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 PIGWQ7Z7B1 504 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 ANKRD46Q86W74 232 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 TGIF2LYQ8IUE0 185 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 MISPQ8IVT2 679 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 MSRB3Q8IXL7 192 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 CLEC4FQ8N1N0 589 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 CNEP1R1Q8N9A8 125 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 GATSQ8NAP1 163 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 PCYOX1LQ8NBM8 494 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 ZNF114Q8NC26 417 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 OR5D16Q8NGK9 328 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 OR4A15Q8NGL6 344 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 OR9I1Q8NGQ6 314 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 OR6K3Q8NGY3 331 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 OR10D3Q8NH80 312 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 SLC38A5Q8WUX1 472 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 SMPDL3BQ92485 455 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 VPS33AQ96AX1 596 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 ZNF524Q96C55 264 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 SPDL1Q96EA4 605 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 ARSGQ96EG1 525 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 CHMP6Q96FZ7 201 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 RNF145Q96MT1 663 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 WFIKKN1Q96NZ8 548 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 TRNT1Q96Q11 434 aaKnown RBP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 OR7D2Q96RA2 312 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 PANX1Q96RD7 426 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 KLHDC3Q9BQ90 382 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 SLC39A3Q9BRY0 314 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 SLC35A5Q9BS91 424 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 C1QTNF4Q9BXJ3 329 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 RSPO3Q9BXY4 272 aaPredicted RBP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 NMUR2Q9GZQ4 415 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 ESRP2Q9H6T0 727 aaKnown RBP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 BCL2L10Q9HD36 194 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 POLE3Q9NRF9 147 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 PLSCR4Q9NRQ2 329 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 FGFR1OP2Q9NVK5 253 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 THUMPD1Q9NXG2 353 aaKnown RBP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 PAQR5Q9NXK6 330 aaPredicted RBP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 KLHL28Q9NXS3 571 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 SLC25A37Q9NYZ2 338 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 CCDC167Q9P0B6 97 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 C6orf203Q9P0P8 240 aaPredicted RBP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 KCNS2Q9ULS6 477 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 FAF1Q9UNN5 650 aaPredicted RBP3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 LIPT1Q9Y234 373 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 PLEKHA6Q9Y2H5 1048 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 CEPT1Q9Y6K0 416 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 VPS13CQ709C8 3753 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 RTTNQ86VV8 2226 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 MYO9AB2RTY4 2548 aa3.07□□□□□ -1.92
UBE2D3-226ENST00000508635 NPIPA5A0A0B4J1W7 369 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 A0A0G2JND7 137 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 RNF103-CHMP3A0A140T963 221 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 GJE1A6NN92 205 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 DEFB108AA8MXU0 73 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 C9JVG2 144 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 NPIPA7E9PJI5 369 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 H3BNH8 94 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 FBP2O00757 339 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 RFXANKO14593 260 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 TNFSF11O14788 317 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 WNT9BO14905 357 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 SLC22A2O15244 555 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ZNF264O43296 627 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 CXCL13O43927 109 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 SNX3O60493 162 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 EIF4E2O60573 245 aaKnown RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 SS18L1O75177 396 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 STX11O75558 287 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 UGT2B17O75795 530 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 AK1P00568 194 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 PLGP00747 810 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ROS1P08922 2347 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 NPIPA8P0DM63 369 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 OR12D1P0DN82 309 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 POU2F1P14859 743 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 CD53P19397 219 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 NCF2P19878 526 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 KLK2P20151 261 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ATP6V1C1P21283 382 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms