RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 RBMY1DP0C7P1 496 aaKnown RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 RBMY1A1P0DJD3 496 aaKnown RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 EIF2S2P20042 333 aaKnown RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 GTF2E2P29084 291 aaKnown RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 TMED10P49755 219 aaKnown RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 GPX6P59796 221 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 PDIA2Q13087 525 aaKnown RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 KYAT1Q16773 422 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 LY6G6FQ5SQ64 297 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 SLC25A30Q5SVS4 291 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 CERS6Q6ZMG9 384 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 PRR22Q8IZ63 422 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 ZNF557Q8N988 423 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 BBS1Q8NFJ9 593 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 OR1S2Q8NGQ3 325 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 ACOT11Q8WXI4 607 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 NRGNQ92686 78 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 FGF14Q92915 247 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 GSDMAQ96QA5 445 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 RIOK2Q9BVS4 552 aaKnown RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 OR51M1Q9H341 326 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 RANBP3Q9H6Z4 567 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 C20orf96Q9NUD7 363 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 LYARQ9NX58 379 aaKnown RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 PTTG3PQ9NZH4 202 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 PDP1Q9P0J1 537 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 TBC1D24Q9ULP9 559 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 SIPA1L3O60292 1781 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 UBR2Q8IWV8 1755 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 DLG5Q8TDM6 1919 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 LRRK1Q38SD2 2015 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 PHF3Q92576 2039 aaKnown RBP3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 TRAV25A0A0B4J276 109 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 KLF18A0A0U1RQI7 1052 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 SMCO2A6NFE2 343 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 GOLGA8TH3BQL2 631 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 TNFSF11O14788 317 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 EIF3HO15372 352 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 FGGP02679 453 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 CCNB1P14635 433 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 TCN1P20061 433 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 COX7A1P24310 79 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 FOXN2P32314 431 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 NAMPTP43490 491 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 VDAC2P45880 294 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 UQCRFS1P47985 274 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 DLX1P56177 255 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 C1QTNF8P60827 252 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 LIPEQ05469 1076 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 SPAG1Q07617 926 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 MAB21L1Q13394 359 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 HADHQ16836 314 aaKnown RBP3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 EOGTQ5NDL2 527 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 GPR157Q5UAW9 335 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 C22orf42Q6IC83 251 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 REEP3Q6NUK4 255 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 SLC16A14Q7RTX9 510 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 LHFPL3Q86UP9 236 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 MYPOPQ86VE0 399 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 FBXL16Q8N461 479 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 LIX1Q8N485 282 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 FBXL13Q8NEE6 735 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 OR9G1Q8NH87 305 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 SLC29A1Q99808 456 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 FGF20Q9NP95 211 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 EXD2Q9NVH0 621 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 GPATCH2LQ9NWQ4 482 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 QPCTLQ9NXS2 382 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 CALYQ9NYX4 217 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 TMEM9Q9P0T7 183 aa3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 LSM7Q9UK45 103 aaKnown RBP3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 DICER1Q9UPY3 1922 aaKnown RBP3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 KDM6AO15550 1401 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P3-201ENST00000502802 DLEC1Q9Y238 1755 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 ANKRD31Q8N7Z5 1873 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 EPOPA6NHQ4 379 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 SIRPB1O00241 398 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 MYL2P10916 166 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 GSTM3P21266 225 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 RPS5P46782 204 aaKnown RBP3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 NPBWR2P48146 333 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 CSNK1EP49674 416 aaKnown RBP3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 ARFRP1Q13795 201 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 CAVIN4Q5BKX8 364 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 PIP5KL1Q5T9C9 394 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 TWF2Q6IBS0 349 aaKnown RBP3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 ZNF774Q6NX45 483 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 ZNF530Q6P9A1 599 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 ANGPTL8Q6UXH0 198 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 MICU2Q8IYU8 434 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 PUSL1Q8N0Z8 303 aaKnown RBP3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 EID2Q8N6I1 236 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 PQLC3Q8N755 202 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 ZNF740Q8NDX6 193 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 RHEBL1Q8TAI7 183 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 C7orf33Q8WU49 177 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 DNTTIP1Q9H147 329 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 PLGRKTQ9HBL7 147 aa3.86□□□□□ -1.79
HMGB1P3-201ENST00000502802 MRPL22Q9NWU5 206 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms