RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 OR2T12Q8NG77 320 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 ZNF519Q8TB69 540 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 FNDC8Q8TC99 324 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 MAN2C1Q9NTJ4 1040 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 TAAR3PQ9P1P4 343 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 A4GNTQ9UNA3 340 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 ELOVL7A1L3X0 281 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 J3KTA2 159 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 FFAR1O14842 300 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 NCR1O76036 304 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 SLC2A10O95528 541 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 SNAP29O95721 258 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 NAT2P11245 290 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 CCNOP22674 350 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 KDELR2P33947 212 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 DVL1P1P54792 670 aaPredicted RBP11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 UCP2P55851 309 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 SELENOWP63302 87 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 FMODQ06828 376 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 CD47Q08722 323 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 SCGB2A2Q13296 93 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 CCNIQ14094 377 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 LAPTM4AQ15012 233 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 PCGF3Q3KNV8 242 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 ALG10Q5BKT4 473 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 ELFN2Q5R3F8 820 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 ARMC4Q5T2S8 1044 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 C8orf82Q6P1X6 216 aaPredicted RBP11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 TSEN54Q7Z6J9 526 aaKnown RBP11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 ARPINQ7Z6K5 226 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 VTCN1Q7Z7D3 282 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 GLCCI1Q86VQ1 547 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 TREML1Q86YW5 311 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 C1orf174Q8IYL3 243 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 LIPHQ8WWY8 451 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 HDAC2Q92769 488 aaKnown RBP11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 TSPAN32Q96QS1 320 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 RBP7Q96R05 134 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 OR51B6Q9H340 312 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 CCDC134Q9H6E4 229 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 SIAEQ9HAT2 523 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 SMURF2Q9HAU4 748 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 HINT3Q9NQE9 182 aaKnown RBP11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 DECR2Q9NUI1 292 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 GRIP1Q9Y3R0 1128 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 UGT2A1Q9Y4X1 527 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 CAPN7Q9Y6W3 813 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 ATRQ13535 2644 aa11.48□□□□□ -0.57
CTDSP1-212ENST00000494067 NPIPB13A6NJU9 1138 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 NPIPB4C9JG80 1138 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 NME4O00746 187 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 SLC22A2O15244 555 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 PPIHO43447 177 aaKnown RBP11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 TFP02787 698 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 HPXP02790 462 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 MMP7P09237 267 aaPredicted RBP11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 SAGP10523 405 aaPredicted RBP11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 IFI30P13284 250 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 ANPEPP15144 967 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 MAKP20794 623 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 COL8A2P25067 703 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 GCH1P30793 250 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 CDAP32320 146 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 YAP1P46937 504 aaKnown RBP11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 ZNF133P52736 654 aaPredicted RBP11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 MRPS34P82930 218 aaKnown RBP11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 SGCAQ16586 387 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 ALKBH6Q3KRA9 238 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 C10orf128Q5T292 105 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 FAM205BPQ63HN1 556 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 RRM2BQ7LG56 351 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 SLC15A3Q8IY34 581 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 MICU2Q8IYU8 434 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 ALDH16A1Q8IZ83 802 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 RFLNBQ8N5W9 214 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 LRRC75AQ8NAA5 344 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 OR1J1Q8NGS3 322 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 NSMAFQ92636 917 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 GTF3AQ92664 365 aaKnown RBP11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 NABP1Q96AH0 204 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 BPIFA2Q96DR5 249 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 PRRC1Q96M27 445 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 FNDC11Q9BVV2 318 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 NDEL1Q9GZM8 345 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 TXNIPQ9H3M7 391 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 RHCGQ9UBD6 479 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 COL6A5A8TX70 2615 aa11.47□□□□□ -0.57
CTDSP1-212ENST00000494067 C17orf100A8MU93 164 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 WNT9BO14905 357 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 GSTA4O15217 222 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 TCF21O43680 179 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 PRSS23O95084 383 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 CLPTM1O96005 669 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 IFNW1P05000 195 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 ZNF250P15622 560 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 ZNF26P17031 533 aaPredicted RBP11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 STOMP27105 288 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 GDI2P50395 445 aaKnown RBP11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 PCBD1P61457 104 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms