RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 RBP7Q96R05 134 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 FUZQ9BT04 418 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 ALG12Q9BV10 488 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 MRPL37Q9BZE1 423 aaKnown RBP11.12□□□□□ -0.63
HDAC1-209ENST00000484305 SIAEQ9HAT2 523 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 NDE1Q9NXR1 346 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 TMEM5Q9Y2B1 443 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 ADAM18Q9Y3Q7 739 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 CMAHPQ9Y471 501 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 SPEF1Q9Y4P9 236 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 A6NIZ1 184 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 B2RBV5 119 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 INAFM1C9JVW0 142 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 H7C1C5 153 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 PTP4A3O75365 173 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 FAM107AO95990 144 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 CD14P08571 375 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 IGFBP1P08833 259 aaPredicted RBP11.11□□□□□ -0.63
HDAC1-209ENST00000484305 NR2C1P13056 603 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 PCSK6P29122 969 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 GLRXP35754 106 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 RPL4P36578 427 aaKnown RBP11.11□□□□□ -0.63
HDAC1-209ENST00000484305 OMPP47874 163 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 LIMS1P48059 325 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 RAP1BP61224 184 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 LCN6P62502 163 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 RAP1AP62834 184 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 GKAP1Q5VSY0 366 aaPredicted RBP11.11□□□□□ -0.63
HDAC1-209ENST00000484305 FAM205BPQ63HN1 556 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 ARIH2OSQ8N7S6 290 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 MRPL24Q96A35 216 aaKnown RBP11.11□□□□□ -0.63
HDAC1-209ENST00000484305 Q96M85 177 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 NSMCE2Q96MF7 247 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 GRHPRQ9UBQ7 328 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 SIGLEC7Q9Y286 467 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 FKBP7Q9Y680 259 aa11.11□□□□□ -0.63
HDAC1-209ENST00000484305 SONP18583 2426 aaKnown RBP11.1□□□□□ -0.63
HDAC1-209ENST00000484305 MGRN1O60291 552 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 ADRA2AP08913 450 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 CSF3P09919 207 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 FAM157BP0CG42 384 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 SLC25A16P16260 332 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 ZNF32P17041 273 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 ITGA2P17301 1181 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 APEX1P27695 318 aaKnown RBP11.1□□□□□ -0.63
HDAC1-209ENST00000484305 MNAT1P51948 309 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 FXYD6P3P58550 94 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 PLP2Q04941 152 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 SPATS1Q496A3 300 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 MESTQ5EB52 335 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 PABPC1L2AQ5JQF8 200 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 FAM27BQ5VT28 67 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 THSD4Q6ZMP0 1018 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 FAM122BQ7Z309 247 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 LRP11Q86VZ4 500 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 CCDC197Q8NCU1 140 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 CPEB3Q8NE35 698 aaKnown RBP11.1□□□□□ -0.63
HDAC1-209ENST00000484305 FNDC8Q8TC99 324 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 NSL1Q96IY1 281 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 RSRC1Q96IZ7 334 aaKnown RBP11.1□□□□□ -0.63
HDAC1-209ENST00000484305 GPA33Q99795 319 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 SYT3Q9BQG1 590 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 RAB1BQ9H0U4 201 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 KCNN2Q9H2S1 579 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 OR51B6Q9H340 312 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 CCNB1IP1Q9NPC3 277 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 MYEF2Q9P2K5 600 aaKnown RBP11.1□□□□□ -0.63
HDAC1-209ENST00000484305 IL20RAQ9UHF4 553 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 SLC7A8Q9UHI5 535 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 FBXO9Q9UK97 447 aaPredicted RBP11.1□□□□□ -0.63
HDAC1-209ENST00000484305 ADAM21Q9UKJ8 722 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 FZR1Q9UM11 496 aa11.1□□□□□ -0.63
HDAC1-209ENST00000484305 ABCA2Q9BZC7 2435 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 IQCMA0A1B0GVH7 501 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 A0A1W2PPL8 197 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 SLC22A23A1A5C7 686 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 UNC119BA6NIH7 251 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 VWC2LB2RUY7 222 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 NDUFB2O95178 105 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 GADD45GO95257 159 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 SNAP29O95721 258 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 PTHP01270 115 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 SCG5P05408 212 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 FABP3P05413 133 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 T-ENOLP0DO92 83 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 LAP3P28838 519 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 EVX1P49640 407 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 PDLIM4P50479 330 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 RPS23P62266 143 aaKnown RBP11.09□□□□□ -0.63
HDAC1-209ENST00000484305 SPIBQ01892 262 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 HSF2Q03933 536 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 LOXL1Q08397 574 aaPredicted RBP11.09□□□□□ -0.63
HDAC1-209ENST00000484305 CARTPTQ16568 116 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 TBC1D28Q2M2D7 210 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 CYP2R1Q6VVX0 501 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 RINLQ6ZS11 566 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 FOXL2NBQ6ZUU3 175 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 MCUR1Q96AQ8 359 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 RASD2Q96D21 266 aa11.09□□□□□ -0.63
HDAC1-209ENST00000484305 ZNF570Q96NI8 536 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms