RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 LYPD4Q6UWN0 246 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 IZUMO2Q6UXV1 221 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 CXXC5Q7LFL8 322 aaKnown RBP11.61□□□□□ -0.55
HDAC1-208ENST00000482310 CPOQ8IVL8 374 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 PACRGLQ8N7B6 248 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 OR6K6Q8NGW6 343 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 NMD3Q96D46 503 aaKnown RBP11.61□□□□□ -0.55
HDAC1-208ENST00000482310 SH3GL3Q99963 347 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 MED18Q9BUE0 208 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 C1QTNF6Q9BXI9 259 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 PRRG3Q9BZD7 231 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 VCX3BQ9H321 246 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 EMC7Q9NPA0 242 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 HINT3Q9NQE9 182 aaKnown RBP11.61□□□□□ -0.55
HDAC1-208ENST00000482310 TMEM38BQ9NVV0 291 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 FAM118AQ9NWS6 357 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 IMPAD1Q9NX62 359 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 AASSQ9UDR5 926 aa11.61□□□□□ -0.55
HDAC1-208ENST00000482310 SPTAN1Q13813 2472 aaKnown RBP11.61□□□□□ -0.55
HDAC1-208ENST00000482310 LOC100130705A0A1B0GUX0 176 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 TVP23AA6NH52 213 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 RPL36A-HNRNPH2H7BZ11 118 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 TLX2O43763 284 aaPredicted RBP11.6□□□□□ -0.55
HDAC1-208ENST00000482310 CNOT4O95628 575 aaKnown RBP11.6□□□□□ -0.55
HDAC1-208ENST00000482310 PATE4P0C8F1 98 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 CD79AP11912 226 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 GGT2P36268 569 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 PCYT1AP49585 367 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 CDC42P60953 191 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 TGFBR3Q03167 851 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 GABRA6Q16445 453 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 TBRG1Q3YBR2 411 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 FBXL19-AS1Q494R0 122 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 ZNF362Q5T0B9 420 aaPredicted RBP11.6□□□□□ -0.55
HDAC1-208ENST00000482310 C10orf128Q5T292 105 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 C6orf52Q5T4I8 152 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 DNM1P34Q6PK57 102 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 WFDC8Q8IUA0 241 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 OR6V1Q8N148 313 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 DHRSXQ8N5I4 330 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 ZNRF4Q8WWF5 429 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 UBE2FQ969M7 185 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 NELFAQ9H3P2 528 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 C8orf4Q9NR00 106 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 RASSF1Q9NS23 344 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 DNAJC27Q9NZQ0 273 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 B9D1Q9UPM9 204 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 UGT2A1Q9Y4X1 527 aa11.6□□□□□ -0.55
HDAC1-208ENST00000482310 IGLV1-36A0A0B4J1U3 117 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 SCG5P05408 212 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 SPI1P17947 270 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 PSMB1P20618 241 aaKnown RBP11.59□□□□□ -0.55
HDAC1-208ENST00000482310 COL8A1P27658 744 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 CRABP1P29762 137 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 GUCA1AP43080 201 aaPredicted RBP11.59□□□□□ -0.55
HDAC1-208ENST00000482310 SH3BGRP55822 239 aaPredicted RBP11.59□□□□□ -0.55
HDAC1-208ENST00000482310 UBE2NP61088 152 aaKnown RBP11.59□□□□□ -0.55
HDAC1-208ENST00000482310 PIGFQ07326 219 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 APOFQ13790 326 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 SNCBQ16143 134 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 ANKRD16Q6P6B7 361 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 UGT2A3Q6UWM9 527 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 B3GLCTQ6Y288 498 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 MEX3BQ6ZN04 569 aaKnown RBP11.59□□□□□ -0.55
HDAC1-208ENST00000482310 C22orf34Q6ZV56 151 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 SLC22A24Q8N4F4 322 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 STEAP2Q8NFT2 490 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 OR2T4Q8NH00 348 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 TMEM163Q8TC26 289 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 FNDC8Q8TC99 324 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 BCL2L2Q92843 193 aaPredicted RBP11.59□□□□□ -0.55
HDAC1-208ENST00000482310 HRASLS5Q96KN8 279 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 WFIKKN1Q96NZ8 548 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 ADI1Q9BV57 179 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 POLR1DQ9Y2S0 133 aa11.59□□□□□ -0.55
HDAC1-208ENST00000482310 CRYBG3Q68DQ2 2970 aa11.58□□□□□ -0.55
HDAC1-208ENST00000482310 ZNF503-AS2A6NEH8 195 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 TUBAL3A6NHL2 446 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 AHCYL1O43865 530 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 HLA-HP01893 362 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 MRPL3P09001 348 aaKnown RBP11.58□□□□□ -0.56
HDAC1-208ENST00000482310 LAP3P28838 519 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 VHLP40337 213 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 RPS27P42677 84 aaKnown RBP11.58□□□□□ -0.56
HDAC1-208ENST00000482310 IL5RAQ01344 420 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 TAB1Q15750 504 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 GLB1L2Q8IW92 636 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 SKA3Q8IX90 412 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 ZNF511Q8NB15 262 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 FGFBP3Q8TAT2 258 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 C11orf40Q8WZ69 217 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 NABP1Q96AH0 204 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 ZMYND19Q96E35 227 aaPredicted RBP11.58□□□□□ -0.56
HDAC1-208ENST00000482310 RDH12Q96NR8 316 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 SNX18Q96RF0 628 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 DDOQ99489 341 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 PITX2Q99697 317 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 HDHD5Q9BXW7 423 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 RNF121Q9H920 327 aa11.58□□□□□ -0.56
HDAC1-208ENST00000482310 SLC17A5Q9NRA2 495 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms