RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 THSD4Q6ZMP0 1018 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 P3H2Q8IVL5 708 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 GLB1L2Q8IW92 636 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 ALDH16A1Q8IZ83 802 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 DEPDC4Q8N2C3 294 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 OR1J2Q8NGS2 313 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 OR2T4Q8NH00 348 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 OR51A7Q8NH64 312 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 MOSPD2Q8NHP6 518 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 TEX47Q8TBZ9 253 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 HDAC2Q92769 488 aaKnown RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 PIGTQ969N2 578 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 NABP1Q96AH0 204 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 TXNDC15Q96J42 360 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 SLC38A2Q96QD8 506 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 MNTQ99583 582 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 GPA33Q99795 319 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 C9orf16Q9BUW7 83 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 BCL2L14Q9BZR8 327 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 HDHD2Q9H0R4 259 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 KCNN2Q9H2S1 579 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 CLEC4MQ9H2X3 399 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 BEX4Q9NWD9 120 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 HAO2Q9NYQ3 351 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF224Q9NZL3 707 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF346Q9UL40 294 aaKnown RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 NDRG4Q9ULP0 352 aaKnown RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 RNF115Q9Y4L5 304 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 A1L4Q6 167 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 RIIAD1A6NNX1 92 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ZAR1LA6NP61 321 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 VSTM5A8MXK1 200 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 SHISA9B4DS77 424 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 C11orf98E9PRG8 122 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 H7C417 338 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 OVOL3O00110 214 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 HS3ST1O14792 307 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 CASQ2O14958 399 aaPredicted RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 SIAH2O43255 324 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 MPZL2O60487 215 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 KHDRBS3O75525 346 aaKnown RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 RAD51DO75771 328 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 DIRAS1O95057 198 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 RENP00797 406 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 APOC1P02654 83 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 RAF1P04049 648 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ADH4P08319 380 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 DANCRP0C864 163 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 GAAP10253 952 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 BMP4P12644 408 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF35P13682 527 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF3P17036 446 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 PAICSP22234 425 aaKnown RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 NOS3P29474 1203 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 DCTDP32321 178 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 RGS6P49758 472 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ALDH3A2P51648 485 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 RAD23AP54725 363 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 NKX6-1P78426 367 aaPredicted RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ARF1P84077 181 aaKnown RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 RUNX1T1Q06455 604 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 CD47Q08722 323 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 RIPK1Q13546 671 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 CAMK2DQ13557 499 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 GGTLC2Q14390 218 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 PGGHGQ32M88 737 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 KRTAP27-1Q3LI81 207 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF672Q499Z4 452 aaPredicted RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 SLX4IPQ5VYV7 408 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 TMEM53Q6P2H8 277 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 DEGS2Q6QHC5 323 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 SPNS3Q6ZMD2 512 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF813Q6ZN06 617 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF704Q6ZNC4 412 aaPredicted RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 C22orf34Q6ZV56 151 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 KRT74Q7RTS7 529 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 JAZF1Q86VZ6 243 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 CDC20BQ86Y33 519 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 PQLC1Q8N2U9 271 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 KDM8Q8N371 416 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 NPEPL1Q8NDH3 523 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 GJC3Q8NFK1 279 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 SLC26A10Q8NG04 563 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 OR9Q2Q8NGE9 314 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 OR8J1Q8NGP2 316 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 OR52J3Q8NH60 311 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 FBXW5Q969U6 566 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 HRASLS5Q96KN8 279 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 LURAP1Q96LR2 239 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 Q96M85 177 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 MYCBPQ99417 103 aaPredicted RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 COQ7Q99807 217 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 FOXC2Q99958 501 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 EMC6Q9BV81 110 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 IFT27Q9BW83 186 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 GSX2Q9BZM3 304 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 OPA3Q9H6K4 179 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 DCLRE1BQ9H816 532 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 NIPAL2Q9H841 368 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms