RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SLC25A47Q6Q0C1 308 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 ZNF620Q6ZNG0 422 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 FOXL2NBQ6ZUU3 175 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 DPPA2Q7Z7J5 298 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 ZNF584Q8IVC4 421 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 AQP12AQ8IXF9 295 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 ADGRG5Q8IZF4 528 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 LRRC18Q8N456 261 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 NUP37Q8NFH4 326 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 OR4F15Q8NGB8 312 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 RBP7Q96R05 134 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 CACNG6Q9BXT2 260 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 REEP1Q9H902 201 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 SAMHD1Q9Y3Z3 626 aaKnown RBP11.18□□□□□ -0.62
COL5A1-206ENST00000465877 U3KQV3 271 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 ZANQ9Y493 2812 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 CR1P17927 2039 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 SLC22A23A1A5C7 686 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 PRSS37A4D1T9 235 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 SOCS2O14508 198 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 PPP1R3DO95685 299 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 NPR2P20594 1047 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 SLC6A6P31641 620 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 APOBEC3AP31941 199 aaPredicted RBP11.17□□□□□ -0.62
COL5A1-206ENST00000465877 RPS6KA3P51812 740 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 HMGA2P52926 109 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 HGFACQ04756 655 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 PPP1R8Q12972 351 aaKnown RBP11.17□□□□□ -0.62
COL5A1-206ENST00000465877 TSPAN31Q12999 210 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 GPR139Q6DWJ6 353 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 OR2T5Q6IEZ7 315 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 KRT80Q6KB66 452 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 VHLLQ6RSH7 139 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 PRSS57Q6UWY2 283 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 DPY19L2P2Q6ZN68 376 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 ADCK1Q86TW2 530 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 LINC00471Q8N535 108 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 IL17RDQ8NFM7 739 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 OR2T29Q8NH02 315 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 FBXO17Q96EF6 278 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 TRMT61AQ96FX7 289 aaKnown RBP11.17□□□□□ -0.62
COL5A1-206ENST00000465877 Q96MF0 132 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 CADM1Q9BY67 442 aaKnown RBP11.17□□□□□ -0.62
COL5A1-206ENST00000465877 SYT4Q9H2B2 425 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 ZNF442Q9H7R0 627 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 SIAEQ9HAT2 523 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 POMPQ9Y244 141 aa11.17□□□□□ -0.62
COL5A1-206ENST00000465877 AHCYL1O43865 530 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 CCNB2O95067 398 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 TXNDC12O95881 172 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 IGHV4-39P01824 125 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 MMP7P09237 267 aaPredicted RBP11.16□□□□□ -0.62
COL5A1-206ENST00000465877 APEHP13798 732 aaKnown RBP11.16□□□□□ -0.62
COL5A1-206ENST00000465877 CTLA4P16410 223 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 DAG1Q14118 895 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 ADIPOQQ15848 244 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 RFX4Q33E94 735 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 ZNF770Q6IQ21 691 aaPredicted RBP11.16□□□□□ -0.62
COL5A1-206ENST00000465877 PTCHD4Q6ZW05 846 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 SPATA24Q86W54 205 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 AQP11Q8NBQ7 271 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 SLC30A7Q8NEW0 376 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 GNPDA2Q8TDQ7 276 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 CANT1Q8WVQ1 401 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 C1orf198Q9H425 327 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 RNF121Q9H920 327 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 CCNB1IP1Q9NPC3 277 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 DLL4Q9NR61 685 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 VSX1Q9NZR4 365 aaPredicted RBP11.16□□□□□ -0.62
COL5A1-206ENST00000465877 SLC7A8Q9UHI5 535 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 GDF2Q9UK05 429 aaPredicted RBP11.16□□□□□ -0.62
COL5A1-206ENST00000465877 IER3IP1Q9Y5U9 82 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 CDH10Q9Y6N8 788 aa11.16□□□□□ -0.62
COL5A1-206ENST00000465877 TCRBV3S1A0A5B6 114 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 H7C417 338 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 IMPA2O14732 288 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 GSC2O15499 205 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 GPRIN2O60269 458 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 MGRN1O60291 552 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 NDUFS7O75251 213 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 ATP5HO75947 161 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 CST1P01037 141 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 SERPINA5P05154 406 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 ZNF35P13682 527 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 CD99P14209 185 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 ZNF32P17041 273 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 HOXB6P17509 224 aaKnown RBP11.15□□□□□ -0.62
COL5A1-206ENST00000465877 MSR1P21757 451 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 LAP3P28838 519 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 THBS4P35443 961 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 RASSF2P50749 326 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 SNRPD2P62316 118 aaKnown RBP11.15□□□□□ -0.62
COL5A1-206ENST00000465877 GALK2Q01415 458 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 HSF2Q03933 536 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 GK3PQ14409 553 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 EFNB3Q15768 340 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 ETFDHQ16134 617 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 SGCAQ16586 387 aa11.15□□□□□ -0.62
COL5A1-206ENST00000465877 RPL13AP3Q6NVV1 102 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms