RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ZNF347Q96SE7 839 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 TMEM109Q9BVC6 243 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 NPHS2Q9NP85 383 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 SDR39U1Q9NRG7 319 aaPredicted RBP15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 THAP1Q9NVV9 213 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 PPIAL4EA0A075B759 164 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 IGHV3OR16-10A0A075B7F0 116 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 PPIAL4CA0A0B4J2A2 164 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 ZSCAN5BA6NJL1 495 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 CPSF4LA6NMK7 179 aaKnown RBP15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 MCIDASD6RGH6 385 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 PPIAL4DF5H284 164 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 BLOC1S5-TXNDC5H3BN57 136 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 TRAPPC2LH3BP13 241 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 M0R3H8 397 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 RNASE1P07998 156 aaKnown RBP15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 PPIAL4FP0DN26 164 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 RBMXP38159 391 aaKnown RBP15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 MMP15P51511 669 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 ZNF74Q16587 644 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 KLF17Q5JT82 389 aaPredicted RBP15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 SWT1Q5T5J6 900 aaKnown RBP15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 BHLHE22Q8NFJ8 381 aaPredicted RBP15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 OR2J1Q9GZK6 312 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 SLITRK2Q9H156 845 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 MSL2Q9HCI7 577 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 CYSLTR2Q9NS75 346 aa15.23■□□□□ 0.03
CHCHD3-203ENST00000448878 IGHMP01871 453 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 GDI2P50395 445 aaKnown RBP15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 TNFAIP6P98066 277 aaPredicted RBP15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 SLC9A3R2Q15599 337 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 SGCAQ16586 387 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 SPRNQ5BIV9 151 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 SPATC1Q76KD6 591 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 ZNF101Q8IZC7 436 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 C10orf111Q8N326 155 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 SPICQ8N5J4 248 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 OR52E2Q8NGJ4 325 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 AKR7LQ8NHP1 331 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 ABHD4Q8TB40 342 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 KLF14Q8TD94 323 aaPredicted RBP15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 TMIGD2Q96BF3 282 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 MARS2Q96GW9 593 aaKnown RBP15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 OR52B2Q96RD2 323 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 DIRC2Q96SL1 478 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 SLC19A3Q9BZV2 496 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 DCAF16Q9NXF7 216 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 SLC25A37Q9NYZ2 338 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 ZDHHC8Q9ULC8 765 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 TRIM33Q9UPN9 1127 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 INSIG2Q9Y5U4 225 aa15.22■□□□□ 0.03
CHCHD3-203ENST00000448878 A0A1W2PRG6 482 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 CHP2O43745 196 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 F13BP05160 661 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 MMP7P09237 267 aaPredicted RBP15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 PPIBP23284 216 aaKnown RBP15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 CDAP32320 146 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 LIPAP38571 399 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 MTNR1AP48039 350 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 STX1BP61266 288 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 SEC61A1P61619 476 aaKnown RBP15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 ENTPD8Q5MY95 495 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 ZNF613Q6PF04 617 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 NANOGNBQ7Z5D8 188 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 AENQ8WTP8 325 aaKnown RBP15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 MAELQ96JY0 434 aaKnown RBP15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 PATZ1Q9HBE1 687 aaKnown RBP15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 TNFRSF19Q9NS68 423 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 SLAMF8Q9P0V8 285 aa15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.21■□□□□ 0.03
CHCHD3-203ENST00000448878 TIMM8AO60220 97 aaPredicted RBP15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 FMO6PO60774 539 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 KNG1P01042 644 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 IGHV2-70P01814 119 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 ZNF12P17014 697 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 ZNF32P17041 273 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 WNT5AP41221 380 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 PPP1CBP62140 327 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 SRSF4Q08170 494 aaKnown RBP15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 NRN1LQ496H8 165 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 ESCO2Q56NI9 601 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 ZMAT1Q5H9K5 638 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 TMEM255AQ5JRV8 349 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 MBNL2Q5VZF2 373 aaKnown RBP15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 LINC00114Q6XXX2 140 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 C17orf107Q6ZR85 190 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 NOXO1Q8NFA2 376 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 VANGL1Q8TAA9 524 aaPredicted RBP15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 NSMAFQ92636 917 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 POM121L2Q96KW2 1035 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 CCT8L2Q96SF2 557 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 EVA1AQ9H8M9 152 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 SIAEQ9HAT2 523 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 SLCO1B3Q9NPD5 702 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 TMEM106BQ9NUM4 274 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 OR5V1Q9UGF6 321 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 ZNF229Q9UJW7 825 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 SLC7A7Q9UM01 511 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 ANGPT4Q9Y264 503 aa15.2■□□□□ 0.02
CHCHD3-203ENST00000448878 SOX21Q9Y651 276 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms