RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 CEACAM7Q14002 265 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 MFSD13AQ14CX5 517 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 QPRTQ15274 297 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 LRRC36Q1X8D7 754 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 EIF2S3LQ2VIR3 472 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 TRIM16LQ309B1 348 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 GLYR1Q49A26 553 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 IFI44LQ53G44 452 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 CYBRD1Q53TN4 286 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 DCST1Q5T197 706 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 PDSS1Q5T2R2 415 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 FNDC7Q5VTL7 733 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 CARD17Q5XLA6 110 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 ENPP6Q6UWR7 440 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 KCTD9Q7L273 389 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 CHMP1BQ7LBR1 199 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 CYP4Z1Q86W10 505 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 DHFR2Q86XF0 187 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 SELENOHQ8IZQ5 122 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 EID3Q8N140 333 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 CLIP4Q8N3C7 705 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 CADM2Q8N3J6 435 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 FADS6Q8N9I5 356 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 FAM83FQ8NEG4 500 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 OR52E4Q8NGH9 312 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 OR5M1Q8NGP8 315 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 CNOT9Q92600 299 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 POP5Q969H6 163 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 TMEM186Q96B77 213 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 ZBTB8AQ96BR9 441 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 TAMM41Q96BW9 452 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 SARAFQ96BY9 339 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 CCDC124Q96CT7 223 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 ASB9Q96DX5 294 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 ARSGQ96EG1 525 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 NEIL1Q96FI4 390 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 GPR137Q96N19 417 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 ZNF570Q96NI8 536 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 PIGQQ9BRB3 760 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 CACNG6Q9BXT2 260 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 RTN4RQ9BZR6 473 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 OR2B2Q9GZK3 357 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 TMEM27Q9HBJ8 222 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 ACKR4Q9NPB9 350 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 FAM212BQ9NTI7 297 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 MED17Q9NVC6 651 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 RLIMQ9NVW2 624 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 DNAJB11Q9UBS4 358 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 TESQ9UGI8 421 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 SCOCQ9UIL1 159 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 ICAM5Q9UMF0 924 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 COA3Q9Y2R0 106 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 MRPS18CQ9Y3D5 142 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 MAB21L2Q9Y586 359 aa5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 SPIN1Q9Y657 262 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-208ENST00000436638 SPEGQ15772 3267 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 A0A1B0GTH9 108 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 MEX3AA1L020 520 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 ZNF729A6NN14 1252 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 GJE1A6NN92 205 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 MARCH11A6NNE9 402 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 C17orf51A8MQB3 221 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 ANKRD65E5RJM6 399 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 LRRN3E7EW58 273 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 F8WDY8 70 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 LGALS8O00214 317 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 SLC33A1O00400 549 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 AQP7O14520 342 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 BCKDKO14874 412 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 ARPC2O15144 300 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 TPST1O60507 370 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 BCAS1O75363 584 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 ACTL6AO96019 429 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 PRB1P04280 392 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 IFNW1P05000 195 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 SERPINA5P05154 406 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 GKN3PP0CG01 181 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 SAGP10523 405 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 TFPIP10646 304 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 PEPDP12955 493 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 ZNF17P17021 662 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 MST1P26927 711 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 MSX2P35548 267 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 TAS2R60P59551 318 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 SELENOWP63302 87 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 FOXF1Q12946 379 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 TSPAN31Q12999 210 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 SKP2Q13309 424 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 DUSP7Q16829 419 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 KLHL12Q53G59 568 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 SOWAHCQ53LP3 525 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 LBHQ53QV2 105 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 PRR30Q53SZ7 412 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 MTX3Q5HYI7 312 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 WBP2NLQ6ICG8 309 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 KLHL17Q6TDP4 642 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 CBLN3Q6UW01 205 aa5.53□□□□□ -1.52
ECHDC1-208ENST00000436638 DEF8Q6ZN54 512 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms