RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PLPP1O14494 284 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 SSSCA1O60232 199 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 ALOX5APP20292 161 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 RBMXL3Q8N7X1 1067 aaKnown RBP11.07□□□□□ -0.64
UBR4-205ENST00000417040 KCNG3Q8TAE7 436 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 WFDC5Q8TCV5 224 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 R3HDMLQ9H3Y0 253 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 NARFLQ9H6Q4 476 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 GPR173Q9NS66 373 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 PHLPP1O60346 1717 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 TMEM221A6NGB7 291 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 OR5H14A6NHG9 310 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 GABARAPH6UMI1 98 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 HIST1H1CP16403 213 aaKnown RBP11.07□□□□□ -0.64
UBR4-205ENST00000417040 NPPBP16860 134 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 SPI1P17947 270 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 SLC25A35Q3KQZ1 300 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 TMEM71Q6P5X7 295 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 CLEC1AQ8NC01 280 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 ARRDC3Q96B67 414 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 SLC22A12Q96S37 553 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 EXO1Q9UQ84 846 aaKnown RBP11.07□□□□□ -0.64
UBR4-205ENST00000417040 ENTPD2Q9Y5L3 495 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 FAM221AA4D161 298 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 GLCEO94923 617 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 OR10J4P0C629 311 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 KIR2DL3P43628 341 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 DUSP3P51452 185 aaPredicted RBP11.06□□□□□ -0.64
UBR4-205ENST00000417040 SLC7A9P82251 487 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 OR8U1Q8NH10 309 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 OR51H1Q8NH63 302 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 CALHM2Q9HA72 323 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 CLCF1Q9UBD9 225 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 CBY3A6NI87 242 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 SOD1P00441 154 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 LPLP06858 475 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 GPX2P18283 190 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 NAT1P18440 290 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 TRMT12Q53H54 448 aaKnown RBP11.06□□□□□ -0.64
UBR4-205ENST00000417040 Q6ZRG5 221 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 ZNF296Q8WUU4 475 aaPredicted RBP11.06□□□□□ -0.64
UBR4-205ENST00000417040 ABHD6Q9BV23 337 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 SPHK1Q9NYA1 384 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 ASH2LQ9UBL3 628 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 IGFBP6P24592 240 aaPredicted RBP11.06□□□□□ -0.64
UBR4-205ENST00000417040 LCN15Q6UWW0 184 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 OVCH1Q7RTY7 1134 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 BHLHE23Q8NDY6 225 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 ZFPM2Q8WW38 1151 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 EMC6Q9BV81 110 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 ANKRD10Q9NXR5 420 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 TRAV36DV7A0A075B6V5 113 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 MTHFD2P13995 350 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 NQO2P16083 231 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 HOXA9P31269 272 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 PCBP3P57721 371 aaKnown RBP11.06□□□□□ -0.64
UBR4-205ENST00000417040 SNTB1Q13884 538 aaKnown RBP11.06□□□□□ -0.64
UBR4-205ENST00000417040 OR2B11Q5JQS5 317 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 MED9Q9NWA0 146 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 DHCR7Q9UBM7 475 aaKnown RBP11.06□□□□□ -0.64
UBR4-205ENST00000417040 PPP1R3CQ9UQK1 317 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 WIF1Q9Y5W5 379 aa11.06□□□□□ -0.64
UBR4-205ENST00000417040 F6UZH7 168 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 IGHV3-9P01782 118 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 SEMG1P04279 462 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 HBG1P69891 147 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 HBG2P69892 147 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 VPS25Q9BRG1 176 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 C12orf10Q9HB07 376 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 HINT3Q9NQE9 182 aaKnown RBP11.05□□□□□ -0.64
UBR4-205ENST00000417040 A0A1B0GTL3 188 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 HLA-HP01893 362 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 RRASP10301 218 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 DCTDP32321 178 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 GABREP78334 506 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 GUCA2AQ02747 115 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 ZNF266Q14584 549 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 DUSP5Q16690 384 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 FAM27D1Q5T7N8 215 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 TMEM268Q5VZI3 342 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 GABRG1Q8N1C3 465 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 UCN3Q969E3 161 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 ZNF2Q9BSG1 426 aaPredicted RBP11.05□□□□□ -0.64
UBR4-205ENST00000417040 SPNS1Q9H2V7 528 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 IL23AQ9NPF7 189 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 CD207Q9UJ71 328 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 ARL2-SNX15V9GYD0 113 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 GOLGA4Q13439 2230 aaKnown RBP11.05□□□□□ -0.64
UBR4-205ENST00000417040 PRAMEF26H0Y7S4 382 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 AKR7A3O95154 331 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 DDAH2O95865 285 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 OR8U8P0C7N1 319 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 CYBAP13498 195 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 NTF3P20783 257 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 FCGR2CP31995 323 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 BMPR1AP36894 532 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 INSL4Q14641 139 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 PHYHD1Q5SRE7 291 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 TEX261Q6UWH6 196 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 C19orf47Q8N9M1 422 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms