RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CD300AQ9UGN4 299 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 TAGLN3Q9UI15 199 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 ADAM21Q9UKJ8 722 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 FZR1Q9UM11 496 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 ATRQ13535 2644 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 FBN1P35555 2871 aaKnown RBP15.22■□□□□ 0.03
LSM5-204ENST00000409909 LOC390937A0A1W2PQ73 354 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 NDUFS8O00217 210 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 DIRAS1O95057 198 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 H1F0P07305 194 aaKnown RBP15.22■□□□□ 0.03
LSM5-204ENST00000409909 HSD17B1P14061 328 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 RHCEP18577 417 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 NR4A2P43354 598 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 ERVK-25P63136 954 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 SEC23BQ15437 767 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 CARTPTQ16568 116 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 SGCAQ16586 387 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 ZBED5Q49AG3 693 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 THEM4Q5T1C6 240 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 PGAM4Q8N0Y7 254 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 ARIH2OSQ8N7S6 290 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 FAM46AQ96IP4 442 aaKnown RBP15.22■□□□□ 0.03
LSM5-204ENST00000409909 LRRC37BQ96QE4 947 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 RBP7Q96R05 134 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 CDRT15Q96T59 188 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 DYNLRB1Q9NP97 96 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 MYOZ1Q9NP98 299 aaPredicted RBP15.22■□□□□ 0.03
LSM5-204ENST00000409909 SLC7A8Q9UHI5 535 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 SAMD4AQ9UPU9 718 aaKnown RBP15.22■□□□□ 0.03
LSM5-204ENST00000409909 ADAM18Q9Y3Q7 739 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 FAM32AQ9Y421 112 aaKnown RBP15.22■□□□□ 0.03
LSM5-204ENST00000409909 CUBNO60494 3623 aa15.22■□□□□ 0.03
LSM5-204ENST00000409909 DNHD1Q96M86 4753 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 TRBV4-1A0A0J9YWV2 114 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 A6NIZ1 184 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 SYNGR3O43761 229 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 MGRN1O60291 552 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 PTP4A3O75365 173 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 SEMG1P04279 462 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 FAM157BP0CG42 384 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 DAOP14920 347 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 APEX1P27695 318 aaKnown RBP15.21■□□□□ 0.03
LSM5-204ENST00000409909 LIMS1P48059 325 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 RAP1BP61224 184 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 RPS23P62266 143 aaKnown RBP15.21■□□□□ 0.03
LSM5-204ENST00000409909 RAP1AP62834 184 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 PABPC1L2AQ5JQF8 200 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 FAM27BQ5VT28 67 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 FAM205BPQ63HN1 556 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 RRM2BQ7LG56 351 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 NEU4Q8WWR8 484 aaPredicted RBP15.21■□□□□ 0.03
LSM5-204ENST00000409909 DHRS1Q96LJ7 313 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 PIMREGQ9BSJ6 248 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 FUZQ9BT04 418 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 TPK1Q9H3S4 243 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 REV1Q9UBZ9 1251 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 V9GYQ6 96 aa15.21■□□□□ 0.03
LSM5-204ENST00000409909 IGHV4-61A0A0C4DH41 118 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 IQCMA0A1B0GVH7 501 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 KIAA1324LA8MWY0 1029 aaPredicted RBP15.2■□□□□ 0.02
LSM5-204ENST00000409909 H7C1C5 153 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 GMNNO75496 209 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 STAMBPO95630 424 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 SNAP29O95721 258 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 SCG5P05408 212 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 CD14P08571 375 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 IGHV4-31P0DP07 118 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 NR2C1P13056 603 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 ZNF32P17041 273 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 RPL4P36578 427 aaKnown RBP15.2■□□□□ 0.02
LSM5-204ENST00000409909 ALDH3B1P43353 468 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 OMPP47874 163 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 LCN6P62502 163 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 PLP2Q04941 152 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 GGTLC2Q14390 218 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 MAD2L1BPQ15013 274 aaPredicted RBP15.2■□□□□ 0.02
LSM5-204ENST00000409909 FGD3Q5JSP0 725 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 SAMD4BQ5PRF9 694 aaKnown RBP15.2■□□□□ 0.02
LSM5-204ENST00000409909 C6orf52Q5T4I8 152 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 FOXL2NBQ6ZUU3 175 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 OR52J3Q8NH60 311 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 FNDC8Q8TC99 324 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 PYURFQ96I23 114 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 Q96M85 177 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 OR51B6Q9H340 312 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 C1orf198Q9H425 327 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 CDH20Q9HBT6 801 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 DUSP13Q9UII6 198 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 TMEM5Q9Y2B1 443 aa15.2■□□□□ 0.02
LSM5-204ENST00000409909 MALRD1Q5VYJ5 2156 aa15.19■□□□□ 0.02
LSM5-204ENST00000409909 A8MV72 311 aaPredicted RBP15.19■□□□□ 0.02
LSM5-204ENST00000409909 LYNX1G3V0Z9 82 aa15.19■□□□□ 0.02
LSM5-204ENST00000409909 M0R233 179 aa15.19■□□□□ 0.02
LSM5-204ENST00000409909 DCTN3O75935 186 aa15.19■□□□□ 0.02
LSM5-204ENST00000409909 CLPTM1O96005 669 aa15.19■□□□□ 0.02
LSM5-204ENST00000409909 PTHP01270 115 aa15.19■□□□□ 0.02
LSM5-204ENST00000409909 ERCC1P07992 297 aaPredicted RBP15.19■□□□□ 0.02
LSM5-204ENST00000409909 LYNX1P0DP58 116 aa15.19■□□□□ 0.02
LSM5-204ENST00000409909 GIFP27352 417 aa15.19■□□□□ 0.02
LSM5-204ENST00000409909 LAP3P28838 519 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms