RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 ZNF770Q6IQ21 691 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-205ENST00000399026 C1orf94Q6P1W5 598 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 KLHL17Q6TDP4 642 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 PTCHD4Q6ZW05 846 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 FAM122BQ7Z309 247 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 OR8D4Q8NGM9 314 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 GNPDA2Q8TDQ7 276 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 AKAP1Q92667 903 aaKnown RBP eCLIP7.28□□□□□ -1.24
BRCC3-205ENST00000399026 NMD3Q96D46 503 aaKnown RBP7.28□□□□□ -1.24
BRCC3-205ENST00000399026 SLC38A2Q96QD8 506 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 GPX7Q96SL4 187 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-205ENST00000399026 SH3GL3Q99963 347 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 NIPSNAP1Q9BPW8 284 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 TMEM204Q9BSN7 226 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 ALG12Q9BV10 488 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 IFT27Q9BW83 186 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 FN3KQ9H479 309 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 DENND2DQ9H6A0 471 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-205ENST00000399026 NGBQ9NPG2 151 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 TBC1D23Q9NUY8 699 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 ARMC1Q9NVT9 282 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 TMEM38BQ9NVV0 291 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 STX18Q9P2W9 335 aaKnown RBP7.28□□□□□ -1.24
BRCC3-205ENST00000399026 GRHPRQ9UBQ7 328 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 ST6GALNAC2Q9UJ37 374 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 ITGB1BP2Q9UKP3 347 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 UGT2A1Q9Y4X1 527 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 IER3IP1Q9Y5U9 82 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 CDH10Q9Y6N8 788 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 OTOGQ6ZRI0 2925 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 AKAP6Q13023 2319 aa7.28□□□□□ -1.24
BRCC3-205ENST00000399026 ALPK2Q86TB3 2170 aa7.27□□□□□ -1.24
BRCC3-205ENST00000399026 A6NIZ1 184 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 SHISA9B4DS77 424 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 XKRYO14609 159 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 HS3ST1O14792 307 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 ATE1O95260 518 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 GASTP01350 101 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 CECR9P0C854 216 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 CTLA4P16410 223 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 CALCRP30988 508 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 GIPRP48546 466 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 PTDSS1P48651 473 aaKnown RBP7.27□□□□□ -1.25
BRCC3-205ENST00000399026 ZNF84P51523 738 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 RPS6KA3P51812 740 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 HMGA2P52926 109 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 RAP1BP61224 184 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 RAP1AP62834 184 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 PIGFQ07326 219 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 KPNB1Q14974 876 aaKnown RBP7.27□□□□□ -1.25
BRCC3-205ENST00000399026 HIST3H3Q16695 136 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 RFX4Q33E94 735 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 C10orf128Q5T292 105 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 LEG1Q6P5S2 330 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 SLC22A25Q6T423 547 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 TMEM108Q6UXF1 575 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 DPY19L2P2Q6ZN68 376 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 JAZF1Q86VZ6 243 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 SKA3Q8IX90 412 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 LRRC18Q8N456 261 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 SLC22A24Q8N4F4 322 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 IQCF1Q8N6M8 205 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 ARIH2OSQ8N7S6 290 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 SDR9C7Q8NEX9 313 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 OR52L1Q8NGH7 329 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 LILRB1Q8NHL6 650 aaPredicted RBP7.27□□□□□ -1.25
BRCC3-205ENST00000399026 FGFBP3Q8TAT2 258 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 GIPC3Q8TF64 312 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 POP5Q969H6 163 aaKnown RBP7.27□□□□□ -1.25
BRCC3-205ENST00000399026 NABP1Q96AH0 204 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 RADILQ96JH8 1075 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 ERMAPQ96PL5 475 aaPredicted RBP7.27□□□□□ -1.25
BRCC3-205ENST00000399026 SYT4Q9H2B2 425 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 MMADHCQ9H3L0 296 aaPredicted RBP7.27□□□□□ -1.25
BRCC3-205ENST00000399026 RERGLQ9H628 205 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 YY1AP1Q9H869 796 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 OBP2BQ9NPH6 170 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 NRIP3Q9NQ35 241 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 PDP1Q9P0J1 537 aaPredicted RBP7.27□□□□□ -1.25
BRCC3-205ENST00000399026 POU2F3Q9UKI9 436 aa7.27□□□□□ -1.25
BRCC3-205ENST00000399026 MAGED1Q9Y5V3 778 aaPredicted RBP7.27□□□□□ -1.25
BRCC3-205ENST00000399026 SLC22A23A1A5C7 686 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 PRSS37A4D1T9 235 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 CENPBD1B2RD01 187 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 RAB36O95755 333 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 GPANK1O95872 356 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 RAF1P04049 648 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 TP53P04637 393 aaPredicted RBP7.26□□□□□ -1.25
BRCC3-205ENST00000399026 NR2C1P13056 603 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 HIST1H1CP16403 213 aaKnown RBP7.26□□□□□ -1.25
BRCC3-205ENST00000399026 PTAFRP25105 342 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 ZNF133P52736 654 aaPredicted RBP7.26□□□□□ -1.25
BRCC3-205ENST00000399026 KEAP1Q14145 624 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 ETFDHQ16134 617 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 SGCAQ16586 387 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 GSG1Q2KHT4 349 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 SLC36A3Q495N2 470 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 ZNF672Q499Z4 452 aaPredicted RBP7.26□□□□□ -1.25
BRCC3-205ENST00000399026 SLC35F1Q5T1Q4 408 aa7.26□□□□□ -1.25
BRCC3-205ENST00000399026 SLC25A47Q6Q0C1 308 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms