RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 NANOS1Q8WY41 292 aaKnown RBP16.76■□□□□ 0.27
HOXA9-202ENST00000396345 SH3GL3Q99963 347 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 RBM4BQ9BQ04 359 aaKnown RBP16.76■□□□□ 0.27
HOXA9-202ENST00000396345 RBM4Q9BWF3 364 aaKnown RBP16.76■□□□□ 0.27
HOXA9-202ENST00000396345 OSBPL10Q9BXB5 764 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 NUAK2Q9H093 628 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 SIAEQ9HAT2 523 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 OR6C68A6NDL8 312 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 ZNF503-AS2A6NEH8 195 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 DPRXA6NFQ7 191 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 MGRN1O60291 552 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 IFNGP01579 166 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 IGFBP5P24593 272 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 LOXP28300 417 aaPredicted RBP16.75■□□□□ 0.27
HOXA9-202ENST00000396345 CRABP1P29762 137 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 ESRRGP62508 458 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 PPP2R2BQ00005 443 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 PIGFQ07326 219 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 BSPH1Q075Z2 132 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 ACSM5Q6NUN0 579 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 FOXL2NBQ6ZUU3 175 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 LRRC18Q8N456 261 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 NABP1Q96AH0 204 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 TSSK2Q96PF2 358 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 HS3ST6Q96QI5 342 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 CIB1Q99828 191 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 CLEC4MQ9H2X3 399 aaPredicted RBP16.75■□□□□ 0.27
HOXA9-202ENST00000396345 MOV10Q9HCE1 1003 aaKnown RBP16.75■□□□□ 0.27
HOXA9-202ENST00000396345 SRA1Q9HD15 236 aaKnown RBP16.75■□□□□ 0.27
HOXA9-202ENST00000396345 RPRD1BQ9NQG5 326 aaKnown RBP16.75■□□□□ 0.27
HOXA9-202ENST00000396345 B3GNT2Q9NY97 397 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 ZNF224Q9NZL3 707 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 TMEFF2Q9UIK5 374 aaPredicted RBP16.75■□□□□ 0.27
HOXA9-202ENST00000396345 B9D1Q9UPM9 204 aa16.75■□□□□ 0.27
HOXA9-202ENST00000396345 COA3Q9Y2R0 106 aaPredicted RBP16.75■□□□□ 0.27
HOXA9-202ENST00000396345 HRNRQ86YZ3 2850 aaPredicted RBP16.74■□□□□ 0.27
HOXA9-202ENST00000396345 RIIAD1A6NNX1 92 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 UBL3O95164 117 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 CD3EP07766 207 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 CBR1P16152 277 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 CDK5Q00535 292 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 GSG1Q2KHT4 349 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 ZNF362Q5T0B9 420 aaPredicted RBP16.74■□□□□ 0.27
HOXA9-202ENST00000396345 TMEM108Q6UXF1 575 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 SLC16A14Q7RTX9 510 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 DPPA2Q7Z7J5 298 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 MDP1Q86V88 176 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 FAM169BQ8N8A8 192 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 CYB561A3Q8NBI2 242 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 SLC37A3Q8NCC5 494 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 FOXN4Q96NZ1 517 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 DDOQ99489 341 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 C9orf16Q9BUW7 83 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 TEX12Q9BXU0 123 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 KCNN2Q9H2S1 579 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 FN3KQ9H479 309 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 SLC25A19Q9HC21 320 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 CMC2Q9NRP2 79 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 CRNNQ9UBG3 495 aaPredicted RBP16.74■□□□□ 0.27
HOXA9-202ENST00000396345 ENOPH1Q9UHY7 261 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 ITPR2Q14571 2701 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 CACNA1DQ01668 2161 aa16.74■□□□□ 0.27
HOXA9-202ENST00000396345 DCTN6O00399 190 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 HMGN1P05114 100 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 PATE4P0C8F1 98 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 ZNF3P17036 446 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 PTAFRP25105 342 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 CD40P25942 277 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 LAP3P28838 519 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 ARR3P36575 388 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 CENPAP49450 140 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 RAB1AP62820 205 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 ELF3P78545 371 aaPredicted RBP16.73■□□□□ 0.27
HOXA9-202ENST00000396345 DAG1Q14118 895 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 RCN1Q15293 331 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 SLC36A2Q495M3 483 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 FAM27BQ5VT28 67 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 TMEM236Q5W0B7 351 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 TMEM53Q6P2H8 277 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 GLB1L2Q8IW92 636 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 OR6V1Q8N148 313 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 FGFBP3Q8TAT2 258 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 SLC38A2Q96QD8 506 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 RACGAP1Q9H0H5 632 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 RNF121Q9H920 327 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 POLE4Q9NR33 117 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 FKBP7Q9Y680 259 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 APCP25054 2843 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 TACC2O95359 2948 aa16.73■□□□□ 0.27
HOXA9-202ENST00000396345 IGLV1-36A0A0B4J1U3 117 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 IGHV1-18A0A0C4DH31 117 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 EI24O14681 340 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 RAB36O95755 333 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 IGKV3-15P01624 115 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 MSR1P21757 451 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 PTDSS1P48651 473 aaKnown RBP16.72■□□□□ 0.27
HOXA9-202ENST00000396345 NPRL3Q12980 569 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 CRMP1Q14194 572 aa16.72■□□□□ 0.27
HOXA9-202ENST00000396345 PTGES3Q15185 160 aaKnown RBP16.72■□□□□ 0.27
HOXA9-202ENST00000396345 C3orf36Q3SXR2 165 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms