RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 EIF1P41567 113 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 RIDAP52758 137 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 GPR176Q14439 515 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ODF4Q2M2E3 257 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 TMEM105Q8N8V8 129 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 OR52N5Q8NH56 324 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 UBASH3BQ8TF42 649 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 TSEN15Q8WW01 171 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 TMEM106AQ96A25 262 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ZFP3Q96NJ6 502 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 MARVELD1Q9BSK0 173 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ABHD6Q9BV23 337 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ABCG5Q9H222 651 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 SMOC1Q9H4F8 434 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 LIN7BQ9HAP6 207 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 MED29Q9NX70 200 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ANKRD10Q9NXR5 420 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 FBXL2Q9UKC9 423 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 RPH3AQ9Y2J0 694 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 HS3ST3B1Q9Y662 390 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 CACNG2Q9Y698 323 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 CHCHD2Q9Y6H1 151 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 TECTAO75443 2155 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 TEX51A0A1B0GUA7 166 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ANXA2P2A6NMY6 339 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 CENPXA8MT69 81 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 CTDSPLO15194 276 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 KHDRBS3O75525 346 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ANXA2P07355 339 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 CELA2AP08217 269 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 FREM3P0C091 2139 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 TCEA1P23193 301 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 FKBP2P26885 142 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 HLA-DMAP28067 261 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 PTGS2P35354 604 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 DDOSTP39656 456 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 FOLR3P41439 243 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 FMODQ06828 376 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 INPP5JQ15735 1006 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 TATDN3Q17R31 274 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 TBRG1Q3YBR2 411 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ATAD3CQ5T2N8 411 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 KRT74Q7RTS7 529 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 LRRTM1Q86UE6 522 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 GLCCI1Q86VQ1 547 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 CMTM4Q8IZR5 234 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 FADS6Q8N9I5 356 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 WDSUB1Q8N9V3 476 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ADPRHL1Q8NDY3 354 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 SLC26A10Q8NG04 563 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 SLC25A43Q8WUT9 341 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 CREB3L1Q96BA8 519 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 MOV10Q9HCE1 1003 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 GTF2A1LQ9UNN4 478 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 EML6Q6ZMW3 1958 aa11.58□□□□□ -0.55
SPTLC1-201ENST00000262554 A0A0B4J293 547 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 TRABD2BA6NFA1 517 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 B4E171 279 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 GSTZ1O43708 216 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 MPZL1O95297 269 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 ZNF883P0CG24 379 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 ADH6P28332 368 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 SLC6A1P30531 599 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 TSPAN7P41732 249 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 BIDP55957 195 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 KCNJ8Q15842 424 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 OR7E24Q6IFN5 339 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 TMEM81Q6P7N7 255 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 ESPNLQ6ZVH7 1005 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 FCRLAQ7L513 359 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 TOMM5Q8N4H5 51 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 OR10AC1Q8NH08 325 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 YIPF5Q969M3 257 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 UPRTQ96BW1 309 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 LRP12Q9Y561 859 aa11.58□□□□□ -0.56
SPTLC1-201ENST00000262554 NSG1A0A0A6YYJ2 146 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 AQP8O94778 261 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 IGHEP01854 428 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 MAS1P04201 325 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 CD63P08962 238 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 RAB40ALP0C0E4 278 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 ADRA2CP18825 462 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 SSR4P51571 173 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 DGCR2P98153 550 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 SLC36A2Q495M3 483 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 RNASE12Q5GAN4 147 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 PRAMEF20Q5VT98 475 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 NDUFAF7Q7L592 441 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 TMPRSS12Q86WS5 348 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 ZNF227Q86WZ6 799 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 UEVLDQ8IX04 471 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 DND1Q8IYX4 353 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 OR51A4Q8NGJ6 313 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 OR5M1Q8NGP8 315 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 RHBDD1Q8TEB9 315 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 RAB40AQ8WXH6 277 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 SLC7A6Q92536 515 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 MCHR2Q969V1 340 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 ZBTB8AQ96BR9 441 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 SLC25A38Q96DW6 304 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms