RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 APCP25054 2843 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 TRAV27A0A087WT01 109 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ARPC4-TTLL3A0A0A6YYG9 625 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 SH3PXD2BA1X283 911 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 NPIPB13A6NJU9 1138 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ZNF99A8MXY4 864 aaPredicted RBP5.68□□□□□ -1.5
BRCC3-209ENST00000620502 EFCAB9A8MZ26 197 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 SHISA9B4DS77 424 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 NPIPB4C9JG80 1138 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 GYG2O15488 501 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 CLOCKO15516 846 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 AKAP8O43823 692 aaKnown RBP5.68□□□□□ -1.5
BRCC3-209ENST00000620502 TRMUO75648 421 aaKnown RBP5.68□□□□□ -1.5
BRCC3-209ENST00000620502 GADD45GO95257 159 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 BCL10O95999 233 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 RAF1P04049 648 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 FABP3P05413 133 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 PGA4P0DJD7 388 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 PGA3P0DJD8 388 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ACADSP16219 412 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ITGA2P17301 1181 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 GPR4P46093 362 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 OMPP47874 163 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 LIMS1P48059 325 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ZNF83P51522 516 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 HMGA2P52926 109 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 PRPS1P60891 318 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 MELKQ14680 651 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 TBRG1Q3YBR2 411 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ANKDD1AQ495B1 522 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ALG10Q5BKT4 473 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 IGFN1Q86VF2 1251 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 DHFR2Q86XF0 187 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ZDHHC21Q8IVQ6 265 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 CDK20Q8IZL9 346 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 OR4K5Q8NGD3 323 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 OR13C2Q8NGS9 318 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 OR6N1Q8NGY5 312 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 OR52J3Q8NH60 311 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 OR51A7Q8NH64 312 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ASB10Q8WXI3 467 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 NEUROG1Q92886 237 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ZNF566Q969W8 418 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 NMD3Q96D46 503 aaKnown RBP5.68□□□□□ -1.5
BRCC3-209ENST00000620502 MBD6Q96DN6 1003 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ASB9Q96DX5 294 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 SLC25A44Q96H78 314 aaPredicted RBP5.68□□□□□ -1.5
BRCC3-209ENST00000620502 GPA33Q99795 319 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 BTBD10Q9BSF8 475 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 THTPAQ9BU02 230 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 CXXC4Q9H2H0 198 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 MUC13Q9H3R2 512 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 OBP2BQ9NPH6 170 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 INIPQ9NRY2 104 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 B3GNT2Q9NY97 397 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 GLTPQ9NZD2 209 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 CRNNQ9UBG3 495 aaPredicted RBP5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ITGB1BP2Q9UKP3 347 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 ZNF346Q9UL40 294 aaKnown RBP5.68□□□□□ -1.5
BRCC3-209ENST00000620502 PLEKHA6Q9Y2H5 1048 aa5.68□□□□□ -1.5
BRCC3-209ENST00000620502 PRR14LQ5THK1 2151 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 DCHS2Q6V1P9 2916 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 ITPR2Q14571 2701 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 IGHV1-18A0A0C4DH31 117 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 A0A1W2PRG6 482 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 CENPBD1B2RD01 187 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 MCIDASD6RGH6 385 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 M0R1B8 84 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 ABCD4O14678 606 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 HS3ST1O14792 307 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 DNAJC8O75937 253 aaPredicted RBP5.67□□□□□ -1.5
BRCC3-209ENST00000620502 SEC14L2O76054 403 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 IGHMP01871 453 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 QDPRP09417 244 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 DANCRP0C864 163 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 SAGP10523 405 aaPredicted RBP5.67□□□□□ -1.5
BRCC3-209ENST00000620502 DNASE1P24855 282 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 PTAFRP25105 342 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 CD40P25942 277 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 RRM2P31350 389 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 MAGEA2P43356 314 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 CSNK1A1P48729 337 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 SLC9A3P48764 834 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 DAP3P51398 398 aaKnown RBP5.67□□□□□ -1.5
BRCC3-209ENST00000620502 ZNF133P52736 654 aaPredicted RBP5.67□□□□□ -1.5
BRCC3-209ENST00000620502 SH3BGRP55822 239 aaPredicted RBP5.67□□□□□ -1.5
BRCC3-209ENST00000620502 SMIM11AP58511 58 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 FXYD6P3P58550 94 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 CTXN1P60606 82 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 TUBA1BP68363 451 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 TUBA4AP68366 448 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 SPOCK1Q08629 439 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 TRAP1Q12931 704 aaKnown RBP5.67□□□□□ -1.5
BRCC3-209ENST00000620502 KEAP1Q14145 624 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 DEFB113Q30KQ7 82 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 ZNF672Q499Z4 452 aaPredicted RBP5.67□□□□□ -1.5
BRCC3-209ENST00000620502 ZBED5Q49AG3 693 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 MTX3Q5HYI7 312 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 FGD3Q5JSP0 725 aa5.67□□□□□ -1.5
BRCC3-209ENST00000620502 KLHL17Q6TDP4 642 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms