RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TVP23AA6NH52 213 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 NPIPA2E9PIF3 369 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 NPIPA3F8WFD2 350 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 SMAD9O15198 467 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 ACTL6AO96019 429 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 PSMA1P25786 263 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 EIF1AXP47813 144 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 CLRN1P58418 232 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 GLO1Q04760 184 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 AQP6Q13520 282 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 SSX6Q7RTT6 188 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 CDC20BQ86Y33 519 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 ZADH2Q8N4Q0 377 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 OR9K2Q8NGE7 335 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 CPNE4Q96A23 557 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 OR51E2Q9H255 320 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 WDR76Q9H967 626 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 J3QLW9 94 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 LALBAP00709 142 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 HLA-DQA2P01906 255 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 PGA4P0DJD7 388 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 PGA3P0DJD8 388 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 ZNF19P17023 458 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 CLDN17P56750 224 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 LSM3P62310 102 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 CAMK2DQ13557 499 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 GPR50Q13585 617 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 ETFDHQ16134 617 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 CDONQ4KMG0 1287 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 C16orf87Q6PH81 154 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 IGFL3Q6UXB1 125 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 GDPGP1Q6ZNW5 385 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 TRILQ7L0X0 811 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 MEIOBQ8N635 442 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 NOXO1Q8NFA2 376 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 SNX33Q8WV41 574 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 C4orf36Q96KX1 117 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 TRIM36Q9NQ86 728 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 DKK4Q9UBT3 224 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 COPS3Q9UNS2 423 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 COA3Q9Y2R0 106 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 PCDHGA9Q9Y5G4 932 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 TMEM14AQ9Y6G1 99 aa15.73■□□□□ 0.11
SHKBP1-224ENST00000600718 SULT1C4O75897 302 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 ZNF708P17019 499 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 PTGS2P35354 604 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 CLDN18P56856 261 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 OR12D2P58182 307 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 TAS2R43P59537 309 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 VBP1P61758 197 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 SPCS2Q15005 226 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 VASNQ6EMK4 673 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 VASH1Q7L8A9 365 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 ZDHHC11Q9H8X9 412 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 KLHL9Q9P2J3 617 aa15.72■□□□□ 0.11
SHKBP1-224ENST00000600718 PHYHO14832 338 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 NR2C1P13056 603 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 KCTD20Q7Z5Y7 419 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 SPACA3Q8IXA5 215 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 RFLNBQ8N5W9 214 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 OR6N2Q8NGY6 317 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 NEIL3Q8TAT5 605 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 CHCHD6Q9BRQ6 235 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 DEFB127Q9H1M4 99 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 LDAHQ9H6V9 325 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 PAQR5Q9NXK6 330 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 ZMIZ1Q9ULJ6 1067 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 STUB1Q9UNE7 303 aa15.71■□□□□ 0.11
SHKBP1-224ENST00000600718 ZNF593O00488 134 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 GPANK1O95872 356 aa15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 CRYBB2P43320 205 aa15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 BMXP51813 675 aa15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 RPS3AP61247 264 aaKnown RBP15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 NCS1P62166 190 aa15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 FMODQ06828 376 aa15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 HIST3H3Q16695 136 aa15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 RNFT1Q5M7Z0 435 aa15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 NEURL2Q9BR09 285 aa15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 MRPL22Q9NWU5 206 aaKnown RBP15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 LAMP5Q9UJQ1 280 aa15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 SF3B6Q9Y3B4 125 aaKnown RBP15.71■□□□□ 0.1
SHKBP1-224ENST00000600718 TRGV5A0A0B4J1U4 118 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 LOC100506127A0A0U1RQW1 187 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 GPX5O75715 221 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 CELP19835 753 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 ALOX5APP20292 161 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 GABRA5P31644 462 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 UGT2B10P36537 528 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 EIF2S3P41091 472 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 GBX2P52951 348 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 TP53I3Q53FA7 332 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 ABLIM2Q6H8Q1 611 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 PLEKHG7Q6ZR37 379 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 DPY19L4Q7Z388 723 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 GLB1L2Q8IW92 636 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 ZIC4Q8N9L1 334 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 ROBO4Q8WZ75 1007 aa15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 INTS12Q96CB8 462 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 ZNF385AQ96PM9 386 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-224ENST00000600718 CCDC86Q9H6F5 360 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms