RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 RBP7Q96R05 134 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 OR2M2Q96R28 347 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 ISYNA1Q9NPH2 558 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 ENPP5Q9UJA9 477 aa18.49■□□□□ 0.55
PNKP-203ENST00000593946 COA3Q9Y2R0 106 aaPredicted RBP18.49■□□□□ 0.55
PNKP-203ENST00000593946 CACNA1CQ13936 2221 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 ZNF432O94892 652 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 CD36P16671 472 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 SIAH3Q8IW03 269 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 TMEM123Q8N131 208 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 FNDC8Q8TC99 324 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 RAB2BQ8WUD1 216 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 WDYHV1Q96HA8 205 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 INTS14Q96SY0 518 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 WDR76Q9H967 626 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 MRPL22Q9NWU5 206 aaKnown RBP18.48■□□□□ 0.55
PNKP-203ENST00000593946 COPS3Q9UNS2 423 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 B3GNT3Q9Y2A9 372 aa18.48■□□□□ 0.55
PNKP-203ENST00000593946 A0A087WV48 116 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 A0A1B0GVC2 190 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 KHDRBS3O75525 346 aaKnown RBP18.47■□□□□ 0.55
PNKP-203ENST00000593946 ACSM1Q08AH1 577 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 C3AR1Q16581 482 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 TSTQ16762 297 aaKnown RBP18.47■□□□□ 0.55
PNKP-203ENST00000593946 CNPY1Q3B7I2 92 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 CARD17Q5XLA6 110 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 RPUSD3Q6P087 351 aaKnown RBP18.47■□□□□ 0.55
PNKP-203ENST00000593946 P2RY8Q86VZ1 359 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 CDC20BQ86Y33 519 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 RNF128Q8TEB7 428 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 SPRYD4Q8WW59 207 aaPredicted RBP18.47■□□□□ 0.55
PNKP-203ENST00000593946 FOXN4Q96NZ1 517 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 YIPF3Q9GZM5 350 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 ISG20L2Q9H9L3 353 aaKnown RBP18.47■□□□□ 0.55
PNKP-203ENST00000593946 PLSCR2Q9NRY7 297 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 RCE1Q9Y256 329 aa18.47■□□□□ 0.55
PNKP-203ENST00000593946 H3BMQ9 156 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 CCRL2O00421 344 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 GABARAPO95166 117 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 HSF2Q03933 536 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 RASGEF1BQ0VAM2 473 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 SSX1Q16384 188 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 C19orf48Q6RUI8 117 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 SLC26A10Q8NG04 563 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 ABHD3Q8WU67 409 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 C12orf43Q96C57 262 aaKnown RBP18.46■□□□□ 0.55
PNKP-203ENST00000593946 MNTQ99583 582 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 ING1Q9UK53 422 aaPredicted RBP18.46■□□□□ 0.55
PNKP-203ENST00000593946 MCTS1Q9ULC4 181 aaKnown RBP18.46■□□□□ 0.55
PNKP-203ENST00000593946 LHX6Q9UPM6 363 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 TP53TG5Q9Y2B4 290 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 PIEZO2Q9H5I5 2752 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 IGKV3D-15A0A087WSY6 115 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 AKAP8O43823 692 aaKnown RBP18.46■□□□□ 0.55
PNKP-203ENST00000593946 SYNGR4O95473 234 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 LALBAP00709 142 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 HLA-DQA2P01906 255 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 GAAP10253 952 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 NR2C1P13056 603 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 ACTA2P62736 377 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 ACTG2P63267 376 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 INAQ16352 499 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 SLC25A47Q6Q0C1 308 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 ATCAYQ86WG3 371 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 OR6N2Q8NGY6 317 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 TMEM54Q969K7 222 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 FOXD3Q9UJU5 478 aaPredicted RBP18.46■□□□□ 0.55
PNKP-203ENST00000593946 ZMIZ1Q9ULJ6 1067 aa18.46■□□□□ 0.55
PNKP-203ENST00000593946 SVILO95425 2214 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 C1QTNF9BB2RNN3 333 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 TAF4O00268 1085 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 AQP7O14520 342 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 WISP2O76076 250 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 C1QTNF9P0C862 333 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 PSKH1P11801 424 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 CPEP16870 476 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 SELENOPP49908 381 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 CTF1Q16619 201 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 CDONQ4KMG0 1287 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 LRFN4Q6PJG9 635 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 DPY19L4Q7Z388 723 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 GLB1L2Q8IW92 636 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 FNDC9Q8TBE3 224 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 MCHR2Q969V1 340 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 C4orf36Q96KX1 117 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 BCL7BQ9BQE9 202 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 PRDM14Q9GZV8 571 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 GLTPQ9NZD2 209 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 KLHL9Q9P2J3 617 aa18.45■□□□□ 0.54
PNKP-203ENST00000593946 GTF3C1Q12789 2109 aa18.44■□□□□ 0.54
PNKP-203ENST00000593946 MED12LQ86YW9 2145 aa18.44■□□□□ 0.54
PNKP-203ENST00000593946 ZNF670-ZNF695F2Z2N8 137 aa18.44■□□□□ 0.54
PNKP-203ENST00000593946 NOL3O60936 208 aaKnown RBP18.44■□□□□ 0.54
PNKP-203ENST00000593946 MT-ND5P03915 603 aa18.44■□□□□ 0.54
PNKP-203ENST00000593946 HRGP04196 525 aa18.44■□□□□ 0.54
PNKP-203ENST00000593946 NTF4P34130 210 aa18.44■□□□□ 0.54
PNKP-203ENST00000593946 CSNK1A1P48729 337 aa18.44■□□□□ 0.54
PNKP-203ENST00000593946 ZNF133P52736 654 aaPredicted RBP18.44■□□□□ 0.54
PNKP-203ENST00000593946 BDH1Q02338 343 aa18.44■□□□□ 0.54
PNKP-203ENST00000593946 TPBGQ13641 420 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 203.7 ms