RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 CGGBP1Q9UFW8 167 aaPredicted RBP11.59□□□□□ -0.55
CSNK1D-219ENST00000581660 PLSCR5A0PG75 271 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 MS4A18H0YCH9 400 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 PIP5K1CO60331 668 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 ENTPD5O75356 428 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 PRG2P13727 222 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 HLA-DOBP13765 273 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 GRPRP30550 384 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 LIPAP38571 399 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 BTG1P62324 171 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 TXNL4AP83876 142 aaKnown RBP11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 HNRNPA0Q13151 305 aaKnown RBP11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 MS4A18Q3C1V0 323 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 LIN52Q52LA3 116 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 SPRNQ5BIV9 151 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 RNF220Q5VTB9 566 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 C5orf46Q6UWT4 87 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 ZNF836Q6ZNA1 936 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 DPPA2Q7Z7J5 298 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 CROCCP2Q86T23 111 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 PEX5LQ8IYB4 626 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 SLC22A24Q8N4F4 322 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 OR6N1Q8NGY5 312 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 RAB40AQ8WXH6 277 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 TAAR8Q969N4 342 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 THOC1Q96FV9 657 aaKnown RBP11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 SLC41A3Q96GZ6 507 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 DCLRE1CQ96SD1 692 aaKnown RBP11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 AKTIPQ9H8T0 292 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 A4GALTQ9NPC4 353 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 AURKAIP1Q9NWT8 199 aaPredicted RBP11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 MARCOQ9UEW3 520 aaPredicted RBP11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 ZDHHC8Q9ULC8 765 aa11.58□□□□□ -0.56
CSNK1D-219ENST00000581660 KIR2DS1A0A191URI9 304 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 PRSS51A0A1B0GVH4 220 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 TNFRSF13BO14836 293 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 CPSF4O95639 269 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 PTHP01270 115 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 WNT2P09544 360 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 EMX2Q04743 252 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 MBNL2Q5VZF2 373 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 C11orf87Q6NUJ2 197 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 NET1Q7Z628 596 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 NUDCD3Q8IVD9 361 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 ICA1LQ8NDH6 482 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 OR1J1Q8NGS3 322 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 AENQ8WTP8 325 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 IPCEF1Q8WWN9 437 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 SLC47A1Q96FL8 570 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 MARS2Q96GW9 593 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 TXNDC15Q96J42 360 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 SIGLEC11Q96RL6 698 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 SSBP3Q9BWW4 388 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 ROPN1BQ9BZX4 212 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 LRMDAQ9H2I8 198 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 ROPN1Q9HAT0 212 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 ASIC5Q9NY37 505 aa11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 NOP53Q9NZM5 478 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.57□□□□□ -0.561e-7■□□□□ 10.2
CSNK1D-219ENST00000581660 V9GYY5 206 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-219ENST00000581660 A0A087WUJ7 227 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 CEACAM18A8MTB9 384 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 NCF2P19878 526 aaPredicted RBP11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 CHI3L1P36222 383 aaPredicted RBP11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 SERPINB5P36952 375 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 MPV17P39210 176 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 MDH2P40926 338 aaKnown RBP11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 NME5P56597 212 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 MAPK11Q15759 364 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 ZNF718Q3SXZ3 478 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 ZMAT1Q5H9K5 638 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 COX20Q5RI15 118 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 GPR157Q5UAW9 335 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 TMEM53Q6P2H8 277 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 Q6ZSV7 163 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 VRK2Q86Y07 508 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 C1orf174Q8IYL3 243 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 MUC20Q8N307 709 aaPredicted RBP11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 SCAIQ8N9R8 606 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 OR52P1PQ8NH57 321 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 TBC1D15Q8TC07 691 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 SLC38A4Q969I6 547 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 TEX37Q96LM6 180 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 SORT1Q99523 831 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 SLC35A5Q9BS91 424 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 NANOGQ9H9S0 305 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 C12orf10Q9HB07 376 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 TMEM38BQ9NVV0 291 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 KLHL14Q9P2G3 628 aa11.56□□□□□ -0.56
CSNK1D-219ENST00000581660 IGKV1D-42A0A075B6H8 117 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 SHOX2O60902 331 aaPredicted RBP11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 NR2F1P10589 423 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 FUT4P22083 530 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 CSNK1A1P48729 337 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 ABCE1P61221 599 aaKnown RBP11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 MPP2Q14168 576 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 NRN1LQ496H8 165 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 SPANXN4Q5MJ08 99 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 ANXA8L1Q5VT79 327 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 WDR88Q6ZMY6 472 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms