RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 IFNA8P32881 189 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 DAP3P51398 398 aaKnown RBP13.65□□□□□ -0.22
CRLF3-203ENST00000578692 CHN2P52757 468 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 SEC24CP53992 1094 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 RIN1Q13671 783 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 SLC30A7Q8NEW0 376 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 NOXO1Q8NFA2 376 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 MOSPD2Q8NHP6 518 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 RP9Q8TA86 221 aaKnown RBP13.65□□□□□ -0.22
CRLF3-203ENST00000578692 SEPHS2Q99611 448 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 SOX7Q9BT81 388 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 ZNF446Q9NWS9 450 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 ARMCX1Q9P291 453 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 STX18Q9P2W9 335 aaKnown RBP13.65□□□□□ -0.22
CRLF3-203ENST00000578692 FZR1Q9UM11 496 aa13.65□□□□□ -0.22
CRLF3-203ENST00000578692 MALRD1Q5VYJ5 2156 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 MGRN1O60291 552 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 CCL2P13500 99 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 ALDH3B1P43353 468 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 ZNF133P52736 654 aaPredicted RBP13.64□□□□□ -0.23
CRLF3-203ENST00000578692 PLP2Q04941 152 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 ARMC4Q5T2S8 1044 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 RGS7BPQ6MZT1 257 aaPredicted RBP13.64□□□□□ -0.23
CRLF3-203ENST00000578692 LRRC18Q8N456 261 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 POU5F2Q8N7G0 328 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 TMEM158Q8WZ71 300 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 LZICQ8WZA0 190 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 RCN3Q96D15 328 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 KCNN2Q9H2S1 579 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 C1orf198Q9H425 327 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 CCDC134Q9H6E4 229 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 CDH20Q9HBT6 801 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 CMTM6Q9NX76 183 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 MYEF2Q9P2K5 600 aaKnown RBP13.64□□□□□ -0.23
CRLF3-203ENST00000578692 A4GNTQ9UNA3 340 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 AP3M1Q9Y2T2 418 aa13.64□□□□□ -0.23
CRLF3-203ENST00000578692 IQCMA0A1B0GVH7 501 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 HTR3EA5X5Y0 456 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 FAM157BP0CG42 384 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 COL8A2P25067 703 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 MAD2L1BPQ15013 274 aaPredicted RBP13.63□□□□□ -0.23
CRLF3-203ENST00000578692 TBC1D28Q2M2D7 210 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 ELFN2Q5R3F8 820 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 FAM120AOSQ5T036 256 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 C10orf128Q5T292 105 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 ARPINQ7Z6K5 226 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 SLC15A3Q8IY34 581 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 PAQR4Q8N4S7 273 aaPredicted RBP13.63□□□□□ -0.23
CRLF3-203ENST00000578692 RBM15BQ8NDT2 890 aaKnown RBP13.63□□□□□ -0.23
CRLF3-203ENST00000578692 OR1J2Q8NGS2 313 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 HPS1Q92902 700 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 BPIFA2Q96DR5 249 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 PRRC1Q96M27 445 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 SNX18Q96RF0 628 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 LRMDAQ9H2I8 198 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 TXNIPQ9H3M7 391 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 SIAEQ9HAT2 523 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 HIF3AQ9Y2N7 669 aa13.63□□□□□ -0.23
CRLF3-203ENST00000578692 NPIPB13A6NJU9 1138 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 NPIPB4C9JG80 1138 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 PIP5K1CO60331 668 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 SLC2A10O95528 541 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 SNAP29O95721 258 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 HPXP02790 462 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 MMP7P09237 267 aaPredicted RBP13.62□□□□□ -0.23
CRLF3-203ENST00000578692 COX4I1P13073 169 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 IFI30P13284 250 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 SRD5A1P18405 259 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 APEX1P27695 318 aaKnown RBP13.62□□□□□ -0.23
CRLF3-203ENST00000578692 IL2RGP31785 369 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 RAD52P43351 418 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 YAP1P46937 504 aaKnown RBP13.62□□□□□ -0.23
CRLF3-203ENST00000578692 UCP2P55851 309 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 SELENOVP59797 346 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 MRPS34P82930 218 aaKnown RBP13.62□□□□□ -0.23
CRLF3-203ENST00000578692 TAF11Q15544 211 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 TRIP10Q15642 601 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 HSP90B2PQ58FF3 399 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 ALG10Q5BKT4 473 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 IL17RELQ6ZVW7 336 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 HDAC2Q92769 488 aaKnown RBP13.62□□□□□ -0.23
CRLF3-203ENST00000578692 RDH5Q92781 318 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 FNDC11Q9BVV2 318 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 OR51B6Q9H340 312 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 SMURF2Q9HAU4 748 aa13.62□□□□□ -0.23
CRLF3-203ENST00000578692 GMPR2Q9P2T1 348 aaKnown RBP13.62□□□□□ -0.23
CRLF3-203ENST00000578692 ZNF346Q9UL40 294 aaKnown RBP13.62□□□□□ -0.23
CRLF3-203ENST00000578692 IGKV1D-43A0A0B4J1Z2 117 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 A0A1W2PPW3 197 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 PHF1O43189 567 aaPredicted RBP13.61□□□□□ -0.23
CRLF3-203ENST00000578692 CLPTM1O96005 669 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 LCKP06239 509 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 NAT2P11245 290 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 ZNF250P15622 560 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 HNF1AP20823 631 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 FUT4P22083 530 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 CDAP32320 146 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 THBS2P35442 1172 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 HSF2Q03933 536 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 LIPEQ05469 1076 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms