RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 ERFP50548 548 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 SNRPD2P62316 118 aaKnown RBP12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 SELENOWP63302 87 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 SNTB2Q13425 540 aaKnown RBP12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 HIST3H3Q16695 136 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 KRT80Q6KB66 452 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 MEX3DQ86XN8 651 aaKnown RBP12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 CDK20Q8IZL9 346 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 SVOPLQ8N434 492 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 OR4F15Q8NGB8 312 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 ASB10Q8WXI3 467 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 FAM168AQ92567 244 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 ZNF566Q969W8 418 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 SLC25A44Q96H78 314 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 ZNF347Q96SE7 839 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 SEPHS2Q99611 448 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 MRPL13Q9BYD1 178 aaKnown RBP12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 PMF1-BGLAPU3KQ54 211 aa12.1□□□□□ -0.47
TNFAIP2-207ENST00000560562 VWC2LB2RUY7 222 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 B9A039 149 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 hCG_2039718K7EN88 272 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 ZNF35P13682 527 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 PPP2R2BQ00005 443 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 MYBPC1Q00872 1141 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 FHL1Q13642 323 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 TMEM249Q2WGJ8 235 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 LCN8Q6JVE9 175 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 TSEN54Q7Z6J9 526 aaKnown RBP12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 CCDC36Q8IYA8 594 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 PQLC1Q8N2U9 271 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 SLC22A24Q8N4F4 322 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 NOXO1Q8NFA2 376 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 LIPHQ8WWY8 451 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 SGTBQ96EQ0 304 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 PRRC1Q96M27 445 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 DOK1Q99704 481 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 SH3GL3Q99963 347 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 POLR2J2Q9GZM3 115 aaKnown RBP12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 POLR2J3Q9H1A7 115 aaKnown RBP12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 MOV10Q9HCE1 1003 aaKnown RBP12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 TMEM38BQ9NVV0 291 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 ACTR3BQ9P1U1 418 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 RHCGQ9UBD6 479 aa12.09□□□□□ -0.47
TNFAIP2-207ENST00000560562 IGKV1D-43A0A0B4J1Z2 117 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 CXCR6O00574 342 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 GSTA4O15217 222 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 DHHO43323 396 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 CRLF1O75462 422 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 PRSS23O95084 383 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 STAMBPO95630 424 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 BAG2O95816 211 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 BCL10O95999 233 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 IGF2P01344 180 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 IFNA14P01570 189 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 HIST1H2ABP04908 130 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 QDPRP09417 244 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 NPR2P20594 1047 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 MAKP20794 623 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 ATP6V1B2P21281 511 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 NR4A1P22736 598 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 DSCR9P59020 149 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 RAB1AP62820 205 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 LOXL1Q08397 574 aaPredicted RBP12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 DAG1Q14118 895 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 RAB39AQ14964 217 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 LAPTM4AQ15012 233 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 ARMC4Q5T2S8 1044 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 HIST3H2AQ7L7L0 130 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 PAQR4Q8N4S7 273 aaPredicted RBP12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 SYT14Q8NB59 555 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 HIST1H2ACQ93077 130 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 MCHR2Q969V1 340 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 NMD3Q96D46 503 aaKnown RBP12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 TNFRSF13CQ96RJ3 184 aa12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 VRK1Q99986 396 aaPredicted RBP12.08□□□□□ -0.48
TNFAIP2-207ENST00000560562 AQP12BA6NM10 295 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 GMNNO75496 209 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 TRMUO75648 421 aaKnown RBP12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 SLC2A10O95528 541 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 IGHG1P01857 330 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 THRBP10828 461 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 BMP4P12644 408 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 SLC25A16P16260 332 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 NCK1P16333 377 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 PPOXP50336 477 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 FMODQ06828 376 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 PIWIL3Q7Z3Z3 882 aaKnown RBP12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 SPATA24Q86W54 205 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 DHFR2Q86XF0 187 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 AQP12AQ8IXF9 295 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 CLDN22Q8N7P3 220 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 OR4K5Q8NGD3 323 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 HDAC2Q92769 488 aaKnown RBP12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 YAE1D1Q9NRH1 226 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 INIPQ9NRY2 104 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 MYEF2Q9P2K5 600 aaKnown RBP12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 MED31Q9Y3C7 131 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 UGT2A1Q9Y4X1 527 aa12.07□□□□□ -0.48
TNFAIP2-207ENST00000560562 STAB1Q9NY15 2570 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms