RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 FOXA1P55317 472 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 RAB6CQ53S08 254 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 ANKRD13BQ86YJ7 626 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 ZIC5Q96T25 663 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 THAP7Q9BT49 309 aaPredicted RBP10.97□□□□□ -0.65
NEK9-210ENST00000557026 RAB6CQ9H0N0 254 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 A3GALT2U3KPV4 340 aa10.97□□□□□ -0.65
NEK9-210ENST00000557026 I3L521 148 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 PIPP12273 146 aaPredicted RBP10.96□□□□□ -0.65
NEK9-210ENST00000557026 ZNF136P52737 540 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 RPS18P62269 152 aaKnown RBP10.96□□□□□ -0.65
NEK9-210ENST00000557026 MAP4K2Q12851 820 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 HES1Q14469 280 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 CNIH2Q6PI25 160 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 FAM217AQ8IXS0 508 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 FAM185AQ8N0U4 392 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 BPIFB2Q8N4F0 458 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 OR51A4Q8NGJ6 313 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 EGLN2Q96KS0 407 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 CIB3Q96Q77 187 aaPredicted RBP10.96□□□□□ -0.65
NEK9-210ENST00000557026 TNFRSF13CQ96RJ3 184 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 AMDHD2Q9Y303 409 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 LOC100289279A0A1B0GTE1 492 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 TMEM202A6NGA9 273 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 TMEM200CA6NKL6 621 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 CNIH1O95406 144 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 LGI1O95970 557 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 F13BP05160 661 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 DEFA4P12838 97 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 LAP3P28838 519 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 NXPH1P58417 271 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 RELAQ04206 551 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 UBE2UQ5VVX9 321 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 C18orf63Q68DL7 685 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 MEX3BQ6ZN04 569 aaKnown RBP10.96□□□□□ -0.65
NEK9-210ENST00000557026 MOB1BQ7L9L4 216 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 SYS1Q8N2H4 156 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 ARIH2OSQ8N7S6 290 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 APOBEC3DQ96AK3 386 aaPredicted RBP10.96□□□□□ -0.65
NEK9-210ENST00000557026 MRGPRX3Q96LB0 322 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 DLL4Q9NR61 685 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 HIF1ANQ9NWT6 349 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 PIGLQ9Y2B2 252 aa10.96□□□□□ -0.65
NEK9-210ENST00000557026 J3QRK9 145 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 TUBG1P23258 451 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 SDHAP31040 664 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 UGT8Q16880 541 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 LRRC37A5PQ49AS3 106 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 OVCH1Q7RTY7 1134 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 ZNF740Q8NDX6 193 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 CMTM2Q8TAZ6 248 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 APOBEC4Q8WW27 367 aaKnown RBP10.96□□□□□ -0.66
NEK9-210ENST00000557026 TP63Q9H3D4 680 aaPredicted RBP10.96□□□□□ -0.66
NEK9-210ENST00000557026 SYNPO2LQ9H987 977 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 HCSTQ9UBK5 93 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 RAB19A4D1S5 217 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 PLPP1O14494 284 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 HPGDSO60760 199 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 CEACAM5P06731 702 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 BLVRBP30043 206 aaPredicted RBP10.96□□□□□ -0.66
NEK9-210ENST00000557026 SSTR4P31391 388 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 SPOCK1Q08629 439 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 GK2Q14410 553 aaPredicted RBP10.96□□□□□ -0.66
NEK9-210ENST00000557026 CFAP77Q6ZQR2 320 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 HMGN2P46Q86SG4 172 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 OR7G2Q8NG99 324 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 OR13C9Q8NGT0 318 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 CNTNAP3BQ96NU0 1288 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 KCNJ16Q9NPI9 418 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 WDR37Q9Y2I8 494 aa10.96□□□□□ -0.66
NEK9-210ENST00000557026 ACOT8O14734 319 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 FRS3O43559 492 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 HPP00738 406 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 LUMP51884 338 aaPredicted RBP10.95□□□□□ -0.66
NEK9-210ENST00000557026 CLDN6P56747 220 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 EDDM3BP56851 147 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 SHBQ15464 509 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 LRRC10Q5BKY1 277 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 ZNF766Q5HY98 468 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 LYPD8Q6UX82 237 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 PIWIL3Q7Z3Z3 882 aaKnown RBP10.95□□□□□ -0.66
NEK9-210ENST00000557026 CMTM3Q96MX0 182 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 AMMECR1Q9Y4X0 333 aaPredicted RBP10.95□□□□□ -0.66
NEK9-210ENST00000557026 FAM171A2A8MVW0 826 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 GOSR2O14653 212 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 ZNF354AO60765 605 aaPredicted RBP10.95□□□□□ -0.66
NEK9-210ENST00000557026 PNLIPP16233 465 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 NDUFB7P17568 137 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 AKR1C1Q04828 323 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 ACSM1Q08AH1 577 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 RNLSQ5VYX0 342 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 ABHD4Q8TB40 342 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 RBMXL1Q96E39 390 aaKnown RBP10.95□□□□□ -0.66
NEK9-210ENST00000557026 SDF2Q99470 211 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 RAB1BQ9H0U4 201 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 TXNIPQ9H3M7 391 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 RNF150Q9ULK6 438 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 MYH8P13535 1937 aa10.95□□□□□ -0.66
NEK9-210ENST00000557026 MYH9P35579 1960 aaKnown RBP10.95□□□□□ -0.66
NEK9-210ENST00000557026 RPS10-NUDT3A0A1W2PQS6 291 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms