RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 HEXAP06865 529 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 NR0B1P51843 470 aaKnown RBP15.96■□□□□ 0.15
RAB40C-205ENST00000539661 INPP5JQ15735 1006 aaPredicted RBP15.96■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF141Q15928 474 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 ARHGAP40Q5TG30 622 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 PLPP4Q5VZY2 271 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 FAM166AQ6J272 317 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 GLYATL2Q8WU03 294 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 OR2A5Q96R48 311 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 ATG5Q9H1Y0 275 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF768Q9H5H4 540 aaKnown RBP15.96■□□□□ 0.15
RAB40C-205ENST00000539661 LAMP5Q9UJQ1 280 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 IKZF2Q9UKS7 526 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 SLC17A4Q9Y2C5 497 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 NOP16Q9Y3C1 178 aaKnown RBP15.96■□□□□ 0.15
RAB40C-205ENST00000539661 F5H0A9 414 aaPredicted RBP15.96■□□□□ 0.14
RAB40C-205ENST00000539661 AMY2AP04746 511 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 CEACAM5P06731 702 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 ITGA5P08648 1049 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 FCRL6Q6DN72 434 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 INO80EQ8NBZ0 244 aaPredicted RBP15.96■□□□□ 0.14
RAB40C-205ENST00000539661 PPP1R1CQ8WVI7 109 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 LCN9Q8WX39 176 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 ING5Q8WYH8 240 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 ARL11Q969Q4 196 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 SLC22A18Q96BI1 424 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 ZBTB8AQ96BR9 441 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 LRRC3BQ96PB8 259 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 CCNL2Q96S94 520 aaPredicted RBP15.96■□□□□ 0.14
RAB40C-205ENST00000539661 LMF2Q9BU23 707 aaKnown RBP15.96■□□□□ 0.14
RAB40C-205ENST00000539661 FANCFQ9NPI8 374 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 ZFP57Q9NU63 452 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 MKL2Q9ULH7 1088 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 TMEM14AQ9Y6G1 99 aa15.96■□□□□ 0.14
RAB40C-205ENST00000539661 ATG2BQ96BY7 2078 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 PHYHO14832 338 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 CT62P0C5K7 136 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 ZNF735P0CB33 412 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 MYOGP15173 224 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 ALG11Q2TAA5 492 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 RAB12Q6IQ22 244 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 FAM122BQ7Z309 247 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 OR4E2Q8NGC2 313 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 THAP6Q8TBB0 222 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 DCBLD2Q96PD2 775 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 WDR76Q9H967 626 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 TMEM100Q9NV29 134 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.95■□□□□ 0.14
RAB40C-205ENST00000539661 OR2AT4A6NND4 320 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 CD14P08571 375 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 DRD3P35462 400 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 BLOC1S1P78537 153 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 SERTAD2Q14140 314 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 NR0B2Q15466 257 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 FDX2Q6P4F2 183 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 CBLN2Q8IUK8 224 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 SKA3Q8IX90 412 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 OR10AC1Q8NH08 325 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 TMEM74BQ9NUR3 256 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 HIF3AQ9Y2N7 669 aa15.95■□□□□ 0.14
RAB40C-205ENST00000539661 EML5Q05BV3 1969 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 LTBP2Q14767 1821 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 A0A0A6YYH2 397 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 A6NJ64 397 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 NARSO43776 548 aaKnown RBP15.94■□□□□ 0.14
RAB40C-205ENST00000539661 LINC00271P0C7V0 271 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 CD79AP11912 226 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 DMWDQ09019 674 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 ZNHIT3Q15649 155 aaPredicted RBP15.94■□□□□ 0.14
RAB40C-205ENST00000539661 AVPI1Q5T686 147 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 GTPBP8Q8N3Z3 284 aaPredicted RBP15.94■□□□□ 0.14
RAB40C-205ENST00000539661 GALNT16Q8N428 558 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 OR51A4Q8NGJ6 313 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 ASB12Q8WXK4 309 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 C4orf45Q96LM5 186 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 SEC11CQ9BY50 192 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 ZNF304Q9HCX3 659 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 INSL6Q9Y581 213 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 A0A1B0GTH9 108 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 F8VVB4 439 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 F8VWA3 439 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 DOK2O60496 412 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 TXNDC12O95881 172 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 CYB5AP00167 134 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 HLA-AP01891 365 aaKnown RBP15.94■□□□□ 0.14
RAB40C-205ENST00000539661 ALOX5APP20292 161 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 SDHAP31040 664 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 GRK6P43250 576 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 PRKXP51817 358 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 ATP1B3P54709 279 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 NAAAQ02083 359 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 GXYLT1Q4G148 440 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 PRSS35Q8N3Z0 413 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 LIPHQ8WWY8 451 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 CNTNAP3BQ96NU0 1288 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 TINAGL1Q9GZM7 467 aaPredicted RBP15.94■□□□□ 0.14
RAB40C-205ENST00000539661 SLC2A8Q9NY64 477 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 OR10H1Q9Y4A9 318 aa15.94■□□□□ 0.14
RAB40C-205ENST00000539661 PTPRSQ13332 1948 aa15.93■□□□□ 0.14
RAB40C-205ENST00000539661 ZNF736B4DX44 427 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms