RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 G3V3Y1 287 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 GOLGA6L19H0YKK7 550 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 H7C2Y5 167 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 M0QXV9 152 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 RAD51BO15315 384 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 TOX3O15405 576 aaPredicted RBP3□□□□□ -1.93
HMGB1P22-201ENST00000505315 TRAPPC3O43617 180 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 SNAP29O95721 258 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 TBX6O95947 436 aaPredicted RBP3□□□□□ -1.93
HMGB1P22-201ENST00000505315 LALBAP00709 142 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 IGHV2-5P01817 119 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 SLC35E2BP0CK96 405 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 SELEP16581 610 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 ADORA2BP29275 332 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 DCTP40126 519 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 CDKN2CP42773 168 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 RPL29P47914 159 aaKnown RBP3□□□□□ -1.93
HMGB1P22-201ENST00000505315 TFPI2P48307 235 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 CCR8P51685 355 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 PLK1P53350 603 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 SUB1P53999 127 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P22-201ENST00000505315 TAS2R60P59551 318 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 OR2B8PP59922 312 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 VBP1P61758 197 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 SRPXP78539 464 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 KDSRQ06136 332 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 TPBGQ13641 420 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 KLF9Q13886 244 aaPredicted RBP3□□□□□ -1.93
HMGB1P22-201ENST00000505315 TFDP2Q14188 446 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 ABRAXAS2Q15018 415 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 EXOC3L4Q17RC7 722 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 C5orf64Q2M2E5 130 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 PARP15Q460N3 678 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 COQ5Q5HYK3 327 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 THEM4Q5T1C6 240 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 IDNKQ5T6J7 187 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 TPTE2P1Q5T6R2 138 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 GPRC6AQ5T6X5 926 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 SLC35E4Q6ICL7 350 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 RFWD3Q6PCD5 774 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 CNIH2Q6PI25 160 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 Q6ZSR9 355 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 LINC00336Q6ZUF6 198 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 FOXL2NBQ6ZUU3 175 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 C16orf82Q7Z2V1 217 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 LHFPL3Q86UP9 236 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 IQCF1Q8N6M8 205 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNF491Q8N8L2 437 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNF738Q8NE65 137 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 BEST4Q8NFU0 473 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 OR51A7Q8NH64 312 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNF461Q8TAF7 563 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNF519Q8TB69 540 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 UBA3Q8TBC4 463 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 NABP1Q96AH0 204 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 RPEQ96AT9 228 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 KCTD14Q9BQ13 255 aaPredicted RBP3□□□□□ -1.93
HMGB1P22-201ENST00000505315 HCAR1Q9BXC0 346 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 CALN1Q9BXU9 219 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 POTEKPQ9BYX7 375 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 NXF3Q9H4D5 531 aaKnown RBP3□□□□□ -1.93
HMGB1P22-201ENST00000505315 PLEKHA1Q9HB21 404 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 IFT46Q9NQC8 304 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 IMP3Q9NV31 184 aaKnown RBP3□□□□□ -1.93
HMGB1P22-201ENST00000505315 VAPAQ9P0L0 249 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 RIMS3Q9UJD0 308 aa3□□□□□ -1.93
HMGB1P22-201ENST00000505315 IGLV3-22A0A075B6J6 115 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 A0A1B0GTH9 108 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 RBMY1BA6NDE4 496 aaKnown RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 RBMY1EA6NEQ0 496 aaKnown RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 OR6C70A6NIJ9 312 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 GOLGA8JA6NMD2 632 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 EFCAB7A8K855 629 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 GOLGA8KD6RF30 607 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 GOLGA8MH3BSY2 632 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 EMC8O43402 210 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 FGF17O60258 216 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 RBMXL2O75526 392 aaKnown RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 NXPH4O95158 308 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 SLC2A10O95528 541 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 ATP6V1G2O95670 118 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 PTTG1O95997 202 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 IGHV3-9P01782 118 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 ARG1P05089 322 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 H2AFZP0C0S5 128 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 RBMY1DP0C7P1 496 aaKnown RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 OCM2P0CE71 109 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 GOLGA8HP0CJ92 632 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 RBMY1A1P0DJD3 496 aaKnown RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 HLA-GP17693 338 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 CNR1P21554 472 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 VDAC1P21796 283 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 HLA-DMAP28067 261 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 PTGDSP41222 190 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 CSNK1DP48730 415 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 RORCP51449 518 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 HNRNPA3P51991 378 aaKnown RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 UGT2B15P54855 530 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 INHBCP55103 352 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 NDUFV3P56181 108 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms