RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	KLHL21	Q9UJP4	597 aa		3.76	□□□□□ -1.81
SSX2IP-208	ENST00000490476	PTBP2	Q9UKA9	531 aa	Known RBP	3.76	□□□□□ -1.81
SSX2IP-208	ENST00000490476	CLEC4A	Q9UMR7	237 aa		3.76	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SPTB	P11277	2137 aa		3.76	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SYNJ2BP-COX16	A0A087WUM0	186 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	METTL21EP	A6NDL7	271 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	C3orf84	H3BNL1	204 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SRPX2	O60687	465 aa	Predicted RBP	3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ZNF253	O75346	499 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SPAG6	O75602	509 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	OPN1LW	P04000	364 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	BCKDHA	P12694	445 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	CTSE	P14091	401 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ANXA13	P27216	316 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	CDH5	P33151	784 aa	Predicted RBP	3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ARL2	P36404	184 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	HPCAL1	P37235	193 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	RPL8	P62917	257 aa	Known RBP	3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SYPL1	Q16563	259 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	CYP51A1	Q16850	503 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	C9orf64	Q5T6V5	341 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	WSCD1	Q658N2	575 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	LINC01561	Q8N1V8	128 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	STK40	Q8N2I9	435 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ARIH2OS	Q8N7S6	290 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	C17orf47	Q8NEP4	570 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	MRAP	Q8TCY5	172 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	FAM222B	Q8WU58	562 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	TRUB1	Q8WWH5	349 aa	Known RBP	3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ZNF396	Q96N95	335 aa	Predicted RBP	3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SIGLEC12	Q96PQ1	595 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SLC30A2	Q9BRI3	323 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	TM2D1	Q9BX74	207 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	HCAR1	Q9BXC0	346 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SPZ1	Q9BXG8	430 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	REG4	Q9BYZ8	158 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	NXF5	Q9H1B4	397 aa	Known RBP	3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	EXOSC3	Q9NQT5	275 aa	Known RBP	3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	RABL2B	Q9UNT1	228 aa		3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	FARSA	Q9Y285	508 aa	Known RBP	3.75	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SAGE2P	A6NJ88	616 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	KRTAP16-1	A8MUX0	517 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	TRIM3	O75382	744 aa	Predicted RBP	3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	LRAT	O95237	230 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	HP	P00738	406 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	STATH	P02808	62 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ALOX5	P09917	674 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ELK3	P41970	407 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	OR1D4	P47884	311 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	PPT1	P50897	306 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ST3GAL3	Q11203	375 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ELAVL3	Q14576	367 aa	Known RBP	3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ALX1	Q15699	326 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	TEX44	Q53QW1	395 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	FAM199X	Q6PEV8	388 aa	Predicted RBP	3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SYT10	Q6XYQ8	523 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	STAC2	Q6ZMT1	411 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	APTX	Q7Z2E3	356 aa	Known RBP	3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ALPK2	Q86TB3	2170 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	UBQLNL	Q8IYU4	475 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	TMEM123	Q8N131	208 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ANKFN1	Q8N957	763 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	STEAP2	Q8NFT2	490 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SLC22A8	Q8TCC7	542 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	VN1R17P	Q8TDU5	208 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	C12orf66	Q96MD2	445 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	CCT8L2	Q96SF2	557 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	CCL19	Q99731	98 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	CCT7	Q99832	543 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SLC6A7	Q99884	636 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	GON7	Q9BXV9	100 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	IMPAD1	Q9NX62	359 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	UBQLN1	Q9UMX0	589 aa	Known RBP	3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ALG6	Q9Y672	507 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	MYH11	P35749	1972 aa		3.74	□□□□□ -1.81
SSX2IP-208	ENST00000490476	WNK2	Q9Y3S1	2297 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ARHGAP21	Q5T5U3	1957 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	IGHV1OR21-1	A0A087WYE8	117 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476		A0A1W2PPR1	153 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476		H3BMQ9	156 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	RAD51B	O15315	384 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ZNF208	O43345	1280 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	TPST2	O60704	377 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	RAMP1	O60894	148 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	KBTBD11	O94819	623 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	SLC2A10	O95528	541 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	TSPAN12	O95859	305 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	CA1	P00915	261 aa	Predicted RBP	3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	LAMP1	P11279	417 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ACADS	P16219	412 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ABO	P16442	354 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	POLR2E	P19388	210 aa	Known RBP	3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	PCMT1	P22061	227 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	CALB2	P22676	271 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	YWHAB	P31946	246 aa	Known RBP	3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	PEX19	P40855	299 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ALDH3B2	P48448	385 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	LIM2	P55344	173 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	PFN3	P60673	137 aa		3.73	□□□□□ -1.81
SSX2IP-208	ENST00000490476	ZNF154	Q13106	437 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms