RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 PCP2Q8IVA1 136 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 PDIK1LQ8N165 341 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 RNF139Q8WU17 664 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF75CPQ92670 426 aaPredicted RBP2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 CEP170P1Q96L14 293 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 TSNARE1Q96NA8 513 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 P2RX4Q99571 388 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 ATP5SQ99766 215 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 NUP58Q9BVL2 599 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 SLC17A9Q9BYT1 436 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 LINC00597Q9H2U6 94 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 RPF2Q9H7B2 306 aaKnown RBP2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 INPP5EQ9NRR6 644 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 CD84Q9UIB8 345 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 KIAA1257Q9ULG3 409 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 F11RQ9Y624 299 aaKnown RBP2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 CARMIL3Q8ND23 1372 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 GTF3C1Q12789 2109 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 IGLV4-69A0A075B6H9 119 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 SGK1O00141 431 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 IGLV2-23P01705 113 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF30P17039 623 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 OMGP23515 440 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 LONP1P36776 959 aaKnown RBP2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 CCNHP51946 323 aaPredicted RBP2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 ACLYP53396 1101 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 IRX3P78415 501 aaPredicted RBP2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 PAX5Q02548 391 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 LRRC63Q05C16 580 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 RSPO1Q2MKA7 263 aaPredicted RBP2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 CCNJQ5T5M9 372 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 ARMC12Q5T9G4 340 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF836Q6ZNA1 936 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 LINC00173Q6ZV60 143 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 STRADAQ7RTN6 431 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 NIPA1Q7RTP0 329 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 MS4A15Q8N5U1 240 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 HSD17B11Q8NBQ5 300 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 OR1S2Q8NGQ3 325 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 FAM104AQ969W3 186 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 CWH43Q9H720 699 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 MYOZ2Q9NPC6 264 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 RBAKQ9NYW8 714 aaPredicted RBP2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 GOLT1BQ9Y3E0 138 aa2.93□□□□□ -1.94
SMNDC1-205ENST00000477763 A0A096LNJ9 63 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 CIB4A0PJX0 185 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 PLAC8L1A1L4L8 177 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 ERICH4A6NGS2 130 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 LRRIQ3A6PVS8 624 aaPredicted RBP2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 HIDE1A8MVS5 230 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 C11orf94C9JXX5 98 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 H0YC42 278 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 CDC7O00311 574 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 AIM2O14862 343 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 MAGEB4O15481 346 aaPredicted RBP2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 RNF13O43567 381 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 SPAG7O75391 227 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 EEDO75530 441 aaKnown RBP2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 CLIC3O95833 236 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 C6orf47O95873 294 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 GZMAP12544 262 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF43P17038 809 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 NAA10P41227 235 aaPredicted RBP2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 CDKN1BP46527 198 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF136P52737 540 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 CCNA1P78396 465 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 TWF1Q12792 350 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 IDI1Q13907 227 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 KCTD19Q17RG1 926 aaPredicted RBP2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 HSP90B2PQ58FF3 399 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 VAX1Q5SQQ9 334 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 SLC8B1Q6J4K2 584 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 ANKRD26P1Q6NSI1 321 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 LYPD2Q6UXB3 125 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF493Q6ZR52 646 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 ASCL5Q7RTU5 278 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 OAFQ86UD1 273 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 OR7G2Q8NG99 324 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 RAB3IL1Q8TBN0 382 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF596Q8TC21 504 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 LKAAEAR1Q8TD35 194 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF578Q96N58 590 aaPredicted RBP2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 ING4Q9UNL4 249 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 TMED5Q9Y3A6 229 aa2.92□□□□□ -1.94
SMNDC1-205ENST00000477763 RLFQ13129 1914 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 CNTNAP1P78357 1384 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 CTAGE15A4D2H0 777 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 C9JVG2 144 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 RAB29O14966 203 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 MRPS12O15235 138 aaKnown RBP2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 CLOCKO15516 846 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 SNAI2O43623 268 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 RAB3DO95716 219 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 AGTP01019 485 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 NSG1P42857 185 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 CYB561P49447 251 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 NCBP2P52298 156 aaKnown RBP eCLIP2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 CDH6P55285 790 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 NUTF2P61970 127 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms