RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 COMTD1Q86VU5 262 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 MIER2Q8N344 545 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC22A24Q8N4F4 322 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 LSMEM1Q8N8F7 131 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 BHLHE22Q8NFJ8 381 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 OR6N1Q8NGY5 312 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 OR6S1Q8NH40 331 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 TCP10LQ8TDR4 215 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 ST7LQ8TDW4 575 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 DNAJA4Q8WW22 397 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 IPCEF1Q8WWN9 437 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 C11orf40Q8WZ69 217 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 CCL17Q92583 94 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM54Q969K7 222 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 TMIGD2Q96BF3 282 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM19Q96HH6 336 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 MOGAT1Q96PD6 335 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 OR52E6Q96RD3 313 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 SH3GL3Q99963 347 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 RHOXF2Q9BQY4 288 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 MMP27Q9H306 513 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 C1orf198Q9H425 327 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 ARMC7Q9H6L4 198 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 CDH20Q9HBT6 801 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 NPHS2Q9NP85 383 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM38BQ9NVV0 291 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 AIG1Q9NVV5 245 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 MRPL39Q9NYK5 338 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 FRRS1LQ9P0K9 344 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 RPS6KB2Q9UBS0 482 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 IFT52Q9Y366 437 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 INSIG2Q9Y5U4 225 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 GPR45Q9Y5Y3 372 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 SOX21Q9Y651 276 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 AUP1Q9Y679 476 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 A0A0G2JPF8 293 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 A0A1B0GUS0 222 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF726A6NNF4 738 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 A8MXK9 166 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 HNRNPCL2B2RXH8 293 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 HNRNPCL3B7ZW38 293 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 LRRN3E7EW58 273 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 F5H0A9 414 aaPredicted RBP4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 PLPP3O14495 311 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 SPRY3O43610 288 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 TYROBPO43914 113 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 HNRNPCL1O60812 293 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 ENTPD5O75356 428 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 SERPINI2O75830 405 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 KNG1P01042 644 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 MT-ND5P03915 603 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 SERPINE1P05121 402 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 ADH4P08319 380 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 MYZAPP0CAP1 466 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 HNRNPCL4P0DMR1 293 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 LBPP18428 481 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 DRD4P21917 467 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 OMGP23515 440 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 RBMXP38159 391 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 MPV17P39210 176 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 CRATP43155 626 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 ETV4P43268 484 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 BIDP55957 195 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 SEC61A1P61619 476 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC3A1Q07837 685 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 MOGQ16653 247 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 TBC1D28Q2M2D7 210 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 GTDC1Q4AE62 458 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 PDCD4Q53EL6 469 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 SPRNQ5BIV9 151 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 SPATA46Q5T0L3 261 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 FAM91A1Q658Y4 838 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 C16orf87Q6PH81 154 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 LRFN4Q6PJG9 635 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 PXKQ7Z7A4 578 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 PARP8Q8N3A8 854 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 KIR3DL3Q8N743 410 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 ICA1LQ8NDH6 482 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 CPEB3Q8NE35 698 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 OR4K5Q8NGD3 323 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 OR1J1Q8NGS3 322 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 OR6X1Q8NH79 312 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 GEMIN6Q8WXD5 167 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 ANP32BQ92688 251 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 MAL2Q969L2 176 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 VPS33AQ96AX1 596 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 MARS2Q96GW9 593 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 PKNOX2Q96KN3 472 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 SORT1Q99523 831 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 EPYCQ99645 322 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 CITED1Q99966 193 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 MRI1Q9BV20 369 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 ASPNQ9BXN1 380 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 NUF2Q9BZD4 464 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 BCL2L14Q9BZR8 327 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 C20orf27Q9GZN8 174 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 MS4A7Q9GZW8 240 aaPredicted RBP4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 MEAF6Q9HAF1 191 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 TPT1P8Q9HAU6 139 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 CACYBPQ9HB71 228 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms