RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 NRN1LQ496H8 165 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 FAM98BQ52LJ0 330 aaKnown RBP11.21□□□□□ -0.61
COL5A1-206ENST00000465877 MESTQ5EB52 335 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF544Q6NX49 715 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 THSD4Q6ZMP0 1018 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 FAM122BQ7Z309 247 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 TGIF2LYQ8IUE0 185 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 SKA3Q8IX90 412 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 SLC22A24Q8N4F4 322 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 WFDC11Q8NEX6 87 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 SLC7A6OSQ96CW6 309 aaPredicted RBP11.21□□□□□ -0.61
COL5A1-206ENST00000465877 NMD3Q96D46 503 aaKnown RBP11.21□□□□□ -0.61
COL5A1-206ENST00000465877 LRGUKQ96M69 825 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 GPX7Q96SL4 187 aaPredicted RBP11.21□□□□□ -0.61
COL5A1-206ENST00000465877 GPA33Q99795 319 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF701Q9NV72 531 aaPredicted RBP11.21□□□□□ -0.61
COL5A1-206ENST00000465877 B3GNT2Q9NY97 397 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF346Q9UL40 294 aaKnown RBP11.21□□□□□ -0.61
COL5A1-206ENST00000465877 CHD3Q12873 2000 aaKnown RBP11.2□□□□□ -0.62
COL5A1-206ENST00000465877 IGKV1D-43A0A0B4J1Z2 117 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 IGHV2OR16-5A0A0B4J2B6 119 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 UNC119BA6NIH7 251 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 OVOL3O00110 214 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 ACOT8O14734 319 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 OR8G3PP0DMU2 310 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 ZNF14P17017 642 aaPredicted RBP11.2□□□□□ -0.62
COL5A1-206ENST00000465877 FPR3P25089 353 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 SDHAP31040 664 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 GIPRP48546 466 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 FABP6P51161 128 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 CHRNB3Q05901 458 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 PIGFQ07326 219 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 KRR1Q13601 381 aaKnown RBP11.2□□□□□ -0.62
COL5A1-206ENST00000465877 AGAP6Q5VW22 663 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 SHEQ5VZ18 495 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 C11orf71Q6IPW1 123 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 ZER1Q7Z7L7 766 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 FBXL14Q8N1E6 418 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 MUC15Q8N387 334 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 OR9Q2Q8NGE9 314 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 FNDC8Q8TC99 324 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 GTPBP3Q969Y2 492 aaKnown RBP11.2□□□□□ -0.62
COL5A1-206ENST00000465877 NABP1Q96AH0 204 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 RASD2Q96D21 266 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 MS4A3Q96HJ5 214 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 Q96M85 177 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 SH3GL3Q99963 347 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 BTBD10Q9BSF8 475 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 GRHPRQ9UBQ7 328 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 IL20RAQ9UHF4 553 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 TMCC3Q9ULS5 477 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 UGT2A1Q9Y4X1 527 aa11.2□□□□□ -0.62
COL5A1-206ENST00000465877 TEX13CA0A0J9YWL9 993 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 XKRYO14609 159 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 ARHGEF9O43307 516 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 PTP4A3O75365 173 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 DNAJC8O75937 253 aaPredicted RBP11.19□□□□□ -0.62
COL5A1-206ENST00000465877 KRT36O76013 467 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 CD8AP01732 235 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 PATE4P0C8F1 98 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 RAP2AP10114 183 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 IFNGR2P38484 337 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 ATP5J2P56134 94 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 RAB1AP62820 205 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 TRAP1Q12931 704 aaKnown RBP11.19□□□□□ -0.62
COL5A1-206ENST00000465877 BNIP1Q12981 228 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 FLOT2Q14254 428 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 PGBD2Q6P3X8 592 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 PGM2L1Q6PCE3 622 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 SMARCD3Q6STE5 483 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 SLC16A14Q7RTX9 510 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 YTHDF3Q7Z739 585 aaKnown RBP11.19□□□□□ -0.62
COL5A1-206ENST00000465877 ARIH2OSQ8N7S6 290 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 OR4C15Q8NGM1 316 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 FGFBP3Q8TAT2 258 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 NSMAFQ92636 917 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 POP5Q969H6 163 aaKnown RBP11.19□□□□□ -0.62
COL5A1-206ENST00000465877 ZNF75AQ96N20 296 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 GRIP2Q9C0E4 1043 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 OR52D1Q9H346 318 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 DENND2DQ9H6A0 471 aaPredicted RBP11.19□□□□□ -0.62
COL5A1-206ENST00000465877 NRIP3Q9NQ35 241 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 CA10Q9NS85 328 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 CBLN4Q9NTU7 201 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 VNN3Q9NY84 501 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 FBXL3Q9UKT7 428 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 ACANP16112 2415 aa11.19□□□□□ -0.62
COL5A1-206ENST00000465877 A0A1W2PPL8 197 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 DHRS12A0PJE2 317 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 AQP12BA6NM10 295 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 TNFRSF11BO00300 401 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 CDAP32320 146 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 GSSP48637 474 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 MRPS34P82930 218 aaKnown RBP11.18□□□□□ -0.62
COL5A1-206ENST00000465877 SNTB2Q13425 540 aaKnown RBP11.18□□□□□ -0.62
COL5A1-206ENST00000465877 RAB39AQ14964 217 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 SLC36A2Q495M3 483 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 THEM4Q5T1C6 240 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 C1orf94Q6P1W5 598 aa11.18□□□□□ -0.62
COL5A1-206ENST00000465877 TMEM53Q6P2H8 277 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms